ID 496680 - BioProject

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Accession: PRJEB26141 ID: 496680

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Indian Ocean - MP0960 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330128. This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Accession	PRJEB26141
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 16-Oct-2018 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	662
WGS master	23
Publications
PubMed	1
PMC	1
Other datasets
BioSample	23
Assembly	22

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

22
22

Assembly	WGS	BioSample	Taxonomy
GCA_950061075.1	CATLVS000000000	SAMEA112957907	Alteromonas macleodii
GCA_950063355.1	CATLZO000000000	SAMEA112957912	Croceibacter atlanticus
GCA_950075785.1	CATMUV000000000	SAMEA112957901	uncultured Alcanivorax sp.
GCA_950069825.1	CATMKF000000000	SAMEA112957899	uncultured Balneolaceae bacterium
GCA_950061185.1	CATLVN000000000	SAMEA112957908	uncultured Candidatus Neomarinimicrobiota bacterium
GCA_950075795.1	CATMUW000000000	SAMEA112957909	uncultured Candidatus Neomarinimicrobiota bacterium
GCA_950075665.1	CATMUF000000000	SAMEA112957906	uncultured Candidatus Poseidoniales archaeon
GCA_950063875.1	CATMAW000000000	SAMEA112957911	uncultured Dehalococcoidia bacterium
GCA_950064125.1	CATMBJ000000000	SAMEA112957897	uncultured Dehalococcoidia bacterium
GCA_950073045.1	CATMQD000000000	SAMEA112957894	uncultured Flavobacteriales bacterium
GCA_950060635.1	CATLVC000000000	SAMEA112957900	uncultured Gammaproteobacteria bacterium
GCA_950060825.1	CATLUW000000000	SAMEA112957898	uncultured Gammaproteobacteria bacterium
GCA_950061135.1	CATLVU000000000	SAMEA112957913	uncultured Oligoflexia bacterium
GCA_950075725.1	CATMUK000000000	SAMEA112957905	uncultured Pelagibacteraceae bacterium
GCA_950060615.1	CATLVJ000000000	SAMEA112957904	uncultured Pseudoalteromonas sp.
GCA_950058865.1	CATLTT000000000	SAMEA112957910	uncultured Roseivirga sp.
GCA_950058895.1	CATLRQ000000000	SAMEA112957902	uncultured Spongiibacter sp.
GCA_950059085.1	CATLRN000000000	SAMEA112957896	uncultured Sulfitobacter sp.
GCA_950075605.1	CATMTZ000000000	SAMEA112957893	uncultured Sulfurimonas sp.
GCA_950060845.1	CATLVE000000000	SAMEA112957903	uncultured Sulfurimonas sp.
GCA_950075775.1	CATMUS000000000	SAMEA112957895	uncultured proteobacterium
GCA_950061495.1	CATLWI000000000	SAMEA112957892	uncultured proteobacterium

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EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Indian Ocean - MP0960 metagenome (marine metagenome) data set.

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