ID 986410 - BioProject

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Accession: PRJEB63337 ID: 986410

EMG produced TPA metagenomics assembly of PRJDB9649 data set (Fecal microbiota transplantation alleviates diabetes peripheral neuropathy).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJDB9649, and was assembled with metaspades v3. More...

Accession	PRJEB63337
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "MGnify: the microbiome analysis resource in 2020.", Nucleic Acids Res, 2020 Jan 8;48(D1):D570-D578
Submission	Registration date: 22-Jun-2023 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6603
WGS master	167
Publications
PubMed	1
PMC	1
Other datasets
BioSample	167
Assembly	167

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

167
167

Assembly	WGS	BioSample	Taxonomy
GCA_959027035.1	CAUFOI000000000	SAMEA114096449	Adlercreutzia equolifaciens
GCA_959021385.1	CAUEUY000000000	SAMEA114096464	Alistipes indistinctus
GCA_959023335.1	CAUFBO000000000	SAMEA114096360	Alistipes putredinis
GCA_959023775.1	CAUFDU000000000	SAMEA114096465	Alistipes senegalensis
GCA_959017895.1	CAUEIY000000000	SAMEA114096437	Anaerobutyricum hallii
GCA_959020855.1	CAUETE000000000	SAMEA114096479	Bacteroides caccae
GCA_959025575.1	CAUFJE000000000	SAMEA114096351	Bacteroides eggerthii
GCA_959021445.1	CAUEVJ000000000	SAMEA114096482	Bifidobacterium adolescentis
GCA_959026205.1	CAUFKZ000000000	SAMEA114096405	Bifidobacterium adolescentis
GCA_959021345.1	CAUEVL000000000	SAMEA114096459	Blautia obeum
GCA_959024375.1	CAUFFF000000000	SAMEA114096420	Blautia wexlerae
GCA_959021525.1	CAUEVR000000000	SAMEA114096496	Blautia wexlerae
GCA_959029445.1	CAUFVE000000000	SAMEA114096447	Butyricimonas faecihominis
GCA_959024395.1	CAUFFP000000000	SAMEA114096439	Candidatus Avimonas narfae
GCA_959026985.1	CAUFNZ000000000	SAMEA114096441	Candidatus Pararuminococcus gallinarum
GCA_959026035.1	CAUFKJ000000000	SAMEA114096395	Cloacibacillus porcorum
GCA_959018025.1	CAUEJS000000000	SAMEA114096509	Coprococcus catus
GCA_959025795.1	CAUFJM000000000	SAMEA114096370	Coprococcus comes
GCA_959024445.1	CAUFGC000000000	SAMEA114096438	Dorea formicigenerans
GCA_959025775.1	CAUFKC000000000	SAMEA114096368	Eubacterium ramulus
GCA_959024285.1	CAUFEU000000000	SAMEA114096403	Eubacterium ventriosum
GCA_959029395.1	CAUFUS000000000	SAMEA114096444	Faecalibacterium prausnitzii
GCA_959025585.1	CAUFIX000000000	SAMEA114096349	Faecalibacterium prausnitzii
GCA_959020685.1	CAUETL000000000	SAMEA114096347	Haemophilus parainfluenzae
GCA_959021335.1	CAUEVG000000000	SAMEA114096430	Holdemanella biformis
GCA_959024225.1	CAUFEY000000000	SAMEA114096397	Klebsiella pneumoniae
GCA_959029505.1	CAUFVB000000000	SAMEA114096457	Klebsiella quasipneumoniae
GCA_959026305.1	CAUFLB000000000	SAMEA114096401	Lachnospira eligens
GCA_959021195.1	CAUEUM000000000	SAMEA114096489	Lactobacillus gasseri
GCA_959021395.1	CAUEVF000000000	SAMEA114096472	Leyella stercorea
GCA_959021105.1	CAUEUC000000000	SAMEA114096491	Limosilactobacillus reuteri
GCA_959020785.1	CAUETO000000000	SAMEA114096445	Oxalobacter formigenes
GCA_959023275.1	CAUFBL000000000	SAMEA114096353	Parabacteroides distasonis
GCA_959023305.1	CAUFBQ000000000	SAMEA114096365	Parabacteroides merdae
GCA_959025615.1	CAUFJF000000000	SAMEA114096361	Phocaeicola plebeius
GCA_959021465.1	CAUEVM000000000	SAMEA114096423	Plesiomonas shigelloides
GCA_959027215.1	CAUFNW000000000	SAMEA114096493	Roseburia inulinivorans
GCA_959021095.1	CAUETX000000000	SAMEA114096484	Ruminococcus bromii
GCA_959018445.1	CAUEKW000000000	SAMEA114096418	Ruminococcus bromii
GCA_959023205.1	CAUFBI000000000	SAMEA114096355	Segatella buccae
GCA_959024335.1	CAUFFA000000000	SAMEA114096412	Segatella copri
GCA_959021075.1	CAUEUI000000000	SAMEA114096492	Streptococcus parasanguinis
GCA_959029185.1	CAUFUK000000000	SAMEA114096425	Streptococcus thermophilus
GCA_959023285.1	CAUFBN000000000	SAMEA114096350	Sutterella wadsworthensis
GCA_959027235.1	CAUFPP000000000	SAMEA114096466	Victivallis vadensis
GCA_959027195.1	CAUFOK000000000	SAMEA114096495	Weissella confusa
GCA_959023315.1	CAUFBW000000000	SAMEA114096363	[Ruminococcus] lactaris
GCA_959023665.1	CAUFDL000000000	SAMEA114096404	uncultured Alistipes sp.
GCA_959026285.1	CAUFLC000000000	SAMEA114096394	uncultured Alistipes sp.
GCA_959023505.1	CAUFCK000000000	SAMEA114096375	uncultured Bacteroides sp.
GCA_959023265.1	CAUFBJ000000000	SAMEA114096359	uncultured Blautia sp.
GCA_959018065.1	CAUEJK000000000	SAMEA114096433	uncultured Blautia sp.
GCA_959025635.1	CAUFJH000000000	SAMEA114096366	uncultured Butyricicoccus sp.
GCA_959027155.1	CAUFOA000000000	SAMEA114096480	uncultured Butyrivibrio sp.
GCA_959021675.1	CAUEWG000000000	SAMEA114096435	uncultured Clostridia bacterium
GCA_959025645.1	CAUFJD000000000	SAMEA114096364	uncultured Clostridia bacterium
GCA_959025685.1	CAUFKG000000000	SAMEA114096352	uncultured Clostridiaceae bacterium
GCA_959019065.1	CAUEMY000000000	SAMEA114096511	uncultured Clostridiaceae bacterium
GCA_959018015.1	CAUEJG000000000	SAMEA114096431	uncultured Clostridiaceae bacterium
GCA_959023355.1	CAUFCC000000000	SAMEA114096369	uncultured Clostridiaceae bacterium
GCA_959023165.1	CAUFBA000000000	SAMEA114096348	uncultured Clostridium sp.
GCA_959020655.1	CAUESQ000000000	SAMEA114096413	uncultured Clostridium sp.
GCA_959021365.1	CAUEVQ000000000	SAMEA114096458	uncultured Clostridium sp.
GCA_959026195.1	CAUFKW000000000	SAMEA114096432	uncultured Clostridium sp.
GCA_959026995.1	CAUFNB000000000	SAMEA114096440	uncultured Clostridium sp.
GCA_959018525.1	CAUELH000000000	SAMEA114096417	uncultured Clostridium sp.
GCA_959017965.1	CAUEIX000000000	SAMEA114096508	uncultured Clostridium sp.
GCA_959018175.1	CAUEJW000000000	SAMEA114096474	uncultured Clostridium sp.
GCA_959024325.1	CAUFFV000000000	SAMEA114096409	uncultured Clostridium sp.
GCA_959025675.1	CAUFJB000000000	SAMEA114096356	uncultured Clostridium sp.
GCA_959025595.1	CAUFJI000000000	SAMEA114096358	uncultured Clostridium sp.
GCA_959025565.1	CAUFJC000000000	SAMEA114096357	uncultured Clostridium sp.
GCA_959025505.1	CAUFIL000000000	SAMEA114096345	uncultured Clostridium sp.
GCA_959021055.1	CAUETY000000000	SAMEA114096490	uncultured Collinsella sp.
GCA_959020715.1	CAUESV000000000	SAMEA114096354	uncultured Collinsella sp.
GCA_959023475.1	CAUFCE000000000	SAMEA114096390	uncultured Collinsella sp.
GCA_959029465.1	CAUFUZ000000000	SAMEA114096446	uncultured Coprobacillus sp.
GCA_959025725.1	CAUFJG000000000	SAMEA114096374	uncultured Corallococcus sp.
GCA_959020985.1	CAUETU000000000	SAMEA114096475	uncultured Desulfovibrio sp.
GCA_959018575.1	CAUELP000000000	SAMEA114096473	uncultured Erysipelotrichaceae bacterium
GCA_959027095.1	CAUFNI000000000	SAMEA114096451	uncultured Eubacteriaceae bacterium
GCA_959023535.1	CAUFCR000000000	SAMEA114096380	uncultured Eubacteriales bacterium
GCA_959021735.1	CAUEWT000000000	SAMEA114096461	uncultured Eubacteriales bacterium
GCA_959021655.1	CAUEWA000000000	SAMEA114096503	uncultured Eubacteriales bacterium
GCA_959021515.1	CAUEVP000000000	SAMEA114096498	uncultured Eubacteriales bacterium
GCA_959020755.1	CAUESZ000000000	SAMEA114096453	uncultured Eubacteriales bacterium
GCA_959021705.1	CAUEWH000000000	SAMEA114096442	uncultured Eubacteriales bacterium
GCA_959020805.1	CAUETN000000000	SAMEA114096456	uncultured Eubacteriales bacterium
GCA_959021355.1	CAUEUW000000000	SAMEA114096462	uncultured Eubacteriales bacterium
GCA_959027105.1	CAUFNS000000000	SAMEA114096471	uncultured Eubacteriales bacterium
GCA_959027065.1	CAUFNE000000000	SAMEA114096448	uncultured Eubacteriales bacterium
GCA_959027135.1	CAUFNQ000000000	SAMEA114096477	uncultured Eubacteriales bacterium
GCA_959029345.1	CAUFUU000000000	SAMEA114096443	uncultured Eubacteriales bacterium
GCA_959025955.1	CAUFJZ000000000	SAMEA114096382	uncultured Eubacteriales bacterium
GCA_959025995.1	CAUFKB000000000	SAMEA114096384	uncultured Eubacteriales bacterium
GCA_959023995.1	CAUFDY000000000	SAMEA114096507	uncultured Eubacteriales bacterium
GCA_959024215.1	CAUFEZ000000000	SAMEA114096396	uncultured Eubacteriales bacterium
GCA_959023825.1	CAUFDM000000000	SAMEA114096470	uncultured Eubacteriales bacterium
GCA_959029495.1	CAUFVD000000000	SAMEA114096454	uncultured Eubacteriales bacterium
GCA_959018715.1	CAUELX000000000	SAMEA114096416	uncultured Eubacteriales bacterium
GCA_959027165.1	CAUFOE000000000	SAMEA114096483	uncultured Eubacteriales bacterium
GCA_959026155.1	CAUFKX000000000	SAMEA114096504	uncultured Eubacteriales bacterium
GCA_959025915.1	CAUFKD000000000	SAMEA114096385	uncultured Eubacteriales bacterium
GCA_959025895.1	CAUFKF000000000	SAMEA114096389	uncultured Eubacteriales bacterium
GCA_959026025.1	CAUFKQ000000000	SAMEA114096398	uncultured Eubacteriales bacterium
GCA_959020995.1	CAUETR000000000	SAMEA114096468	uncultured Eubacterium sp.
GCA_959024315.1	CAUFFL000000000	SAMEA114096414	uncultured Eubacterium sp.
GCA_959024605.1	CAUFFQ000000000	SAMEA114096427	uncultured Eubacterium sp.
GCA_959029195.1	CAUFUA000000000	SAMEA114096426	uncultured Eubacterium sp.
GCA_959021265.1	CAUEUX000000000	SAMEA114096481	uncultured Eubacterium sp.
GCA_959021495.1	CAUEVO000000000	SAMEA114096497	uncultured Eubacterium sp.
GCA_959021695.1	CAUEWB000000000	SAMEA114096429	uncultured Eubacterium sp.
GCA_959021845.1	CAUEXB000000000	SAMEA114096452	uncultured Eubacterium sp.
GCA_959021545.1	CAUEWD000000000	SAMEA114096488	uncultured Faecalibacterium sp.
GCA_959029245.1	CAUFUG000000000	SAMEA114096419	uncultured Faecalibacterium sp.
GCA_959020825.1	CAUESY000000000	SAMEA114096415	uncultured Firmicutes bacterium
GCA_959021435.1	CAUEVH000000000	SAMEA114096487	uncultured Firmicutes bacterium
GCA_959029215.1	CAUFTY000000000	SAMEA114096500	uncultured Firmicutes bacterium
GCA_959029365.1	CAUFUR000000000	SAMEA114096434	uncultured Firmicutes bacterium
GCA_959018635.1	CAUELT000000000	SAMEA114096421	uncultured Gemmiger sp.
GCA_959025745.1	CAUFJV000000000	SAMEA114096373	uncultured Lachnospiraceae bacterium
GCA_959025845.1	CAUFJT000000000	SAMEA114096379	uncultured Lachnospiraceae bacterium
GCA_959023455.1	CAUFCG000000000	SAMEA114096383	uncultured Lachnospiraceae bacterium
GCA_959023685.1	CAUFDA000000000	SAMEA114096402	uncultured Lachnospiraceae bacterium
GCA_959026085.1	CAUFKM000000000	SAMEA114096399	uncultured Megasphaera sp.
GCA_959023515.1	CAUFCD000000000	SAMEA114096388	uncultured Methanomassiliicoccales archaeon
GCA_959021415.1	CAUEVI000000000	SAMEA114096478	uncultured Olsenella sp.
GCA_959023395.1	CAUFBX000000000	SAMEA114096372	uncultured Opitutales bacterium
GCA_959020645.1	CAUESS000000000	SAMEA114096410	uncultured Oscillospiraceae bacterium
GCA_959023765.1	CAUFEI000000000	SAMEA114096476	uncultured Oscillospiraceae bacterium
GCA_959023525.1	CAUFCM000000000	SAMEA114096391	uncultured Oscillospiraceae bacterium
GCA_959024145.1	CAUFEO000000000	SAMEA114096381	uncultured Oscillospiraceae bacterium
GCA_959018275.1	CAUEKJ000000000	SAMEA114096428	uncultured Oscillospiraceae bacterium
GCA_959027305.1	CAUFPE000000000	SAMEA114096485	uncultured Oscillospiraceae bacterium
GCA_959026075.1	CAUFKV000000000	SAMEA114096393	uncultured Oscillospiraceae bacterium
GCA_959026165.1	CAUFKU000000000	SAMEA114096510	uncultured Oscillospiraceae bacterium
GCA_959021025.1	CAUEUE000000000	SAMEA114096411	uncultured Oscillospiraceae bacterium
GCA_959027045.1	CAUFOD000000000	SAMEA114096436	uncultured Oscillospiraceae bacterium
GCA_959026105.1	CAUFKT000000000	SAMEA114096407	uncultured Oscillospiraceae bacterium
GCA_959021015.1	CAUETW000000000	SAMEA114096486	uncultured Oscillospiraceae bacterium
GCA_959025715.1	CAUFJO000000000	SAMEA114096378	uncultured Oscillospiraceae bacterium
GCA_959027185.1	CAUFOG000000000	SAMEA114096502	uncultured Oscillospiraceae bacterium
GCA_959026275.1	CAUFLS000000000	SAMEA114096506	uncultured Prevotella sp.
GCA_959027125.1	CAUFNO000000000	SAMEA114096460	uncultured Prevotella sp.
GCA_959029435.1	CAUFVF000000000	SAMEA114096424	uncultured Prevotella sp.
GCA_959020665.1	CAUETS000000000	SAMEA114096346	uncultured Romboutsia sp.
GCA_959025655.1	CAUFJN000000000	SAMEA114096362	uncultured Romboutsia sp.
GCA_959026315.1	CAUFLH000000000	SAMEA114096406	uncultured Roseburia sp.
GCA_959019265.1	CAUENX000000000	SAMEA114096505	uncultured Roseburia sp.
GCA_959023425.1	CAUFCI000000000	SAMEA114096377	uncultured Ruminococcus sp.
GCA_959023345.1	CAUFBU000000000	SAMEA114096367	uncultured Ruminococcus sp.
GCA_959021505.1	CAUEVN000000000	SAMEA114096501	uncultured Ruminococcus sp.
GCA_959021405.1	CAUEVD000000000	SAMEA114096469	uncultured Ruminococcus sp.
GCA_959024175.1	CAUFEM000000000	SAMEA114096387	uncultured Ruminococcus sp.
GCA_959023845.1	CAUFDC000000000	SAMEA114096467	uncultured Ruminococcus sp.
GCA_959025865.1	CAUFKA000000000	SAMEA114096392	uncultured Ruminococcus sp.
GCA_959029455.1	CAUFVA000000000	SAMEA114096450	uncultured Ruminococcus sp.
GCA_959018375.1	CAUEKR000000000	SAMEA114096422	uncultured Ruminococcus sp.
GCA_959020845.1	CAUETA000000000	SAMEA114096455	uncultured Staphylococcus sp.
GCA_959027255.1	CAUFNX000000000	SAMEA114096494	uncultured Streptococcus sp.
GCA_959027115.1	CAUFNH000000000	SAMEA114096463	uncultured Subdoligranulum sp.
GCA_959025835.1	CAUFJP000000000	SAMEA114096376	uncultured Subdoligranulum sp.
GCA_959023365.1	CAUFBR000000000	SAMEA114096371	uncultured Sutterella sp.
GCA_959023545.1	CAUFCL000000000	SAMEA114096386	uncultured Sutterella sp.
GCA_959026045.1	CAUFKH000000000	SAMEA114096400	uncultured Sutterella sp.
GCA_959020815.1	CAUESX000000000	SAMEA114096499	uncultured bacterium
GCA_959020765.1	CAUESW000000000	SAMEA114096408	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJDB9649 data set (Fecal microbiota transplantation alleviates diabetes peripheral neuropathy).

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