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Accession: PRJNA1042791 ID: 1042791

Metagenomic sequencing of microbial communities originating from the deep-sea brines, Palmahim Disturbance, Southeastern Mediterranean Sea

Using metagenomics, we investigated the dense microbial communities that occupy small deep-sea brine pools found in the Southeastern Mediterranean Sea. More...
AccessionPRJNA1042791
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "How do interactions and metabolic handoffs drive the functionality of microbial communities associated with the discharge of hydrocarbon-rich brines in the deep sea?" (Grant ID 1359/23, Israeli Science Foundation)
  • "Functional repertoire of hydrocarbon seep microbiota in the warm oligotrophic southeastern Mediterranean Sea: molecular basis for adaptation" (Grant ID 913/19, Israeli Science Foundation)
SubmissionRegistration date: 19-Nov-2023
Israel Oceanographic and Limnological Research
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)266
SRA Experiments10
Other datasets
BioSample276
Assembly266
Assembly details:
Assembly levelNumber of Assemblies
260
6
266
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_034660295.1ScaffoldJAYEIV000000000SAMN38319582
MAG182
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MAG058
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MAG168
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MAG176
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MAG220
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MAG020
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MAG219
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MAG100
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MAG065
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MAG232
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MAG235
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MAG236
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MAG059
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MAG050
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MAG001
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MAG022
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MAG015
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MAG009
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MAG027
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MAG031
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MAG041
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MAG067
GCA_034721935.1ScaffoldJAYENE000000000SAMN38319469
MAG063
GCA_034722195.1ScaffoldJAYENQ000000000SAMN38319457
MAG051
GCA_034716635.1ScaffoldJAYEKI000000000SAMN38319543
MAG141
GCA_034716915.1ScaffoldJAYEKY000000000SAMN38319527
MAG125
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MAG267
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MAG089
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MAG071
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MAG170
GCA_034660695.1ScaffoldJAYEJS000000000SAMN38319559
MAG157
GCA_034722735.1ScaffoldJAYEOG000000000SAMN38319441
MAG035
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MAG002
GCA_034660055.1ScaffoldJAYEIL000000000SAMN38319592
MAG192
GCA_034660895.1ScaffoldJAYEKF000000000SAMN38319546
MAG144
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MAG164
GCA_034659095.1ScaffoldJAYEGQ000000000SAMN38319639
MAG242
GCA_034660375.1ScaffoldJAYEIY000000000SAMN38319579
MAG179
GCA_034660855.1ScaffoldJAYEJZ000000000SAMN38319552
MAG150
GCA_034716135.1ScaffoldJAYEFJ000000000SAMN38319672
MAG276
GCA_034717595.1ScaffoldJAYELN000000000SAMN38319512
MAG106
GCA_034660235.1ScaffoldJAYEIW000000000SAMN38319581
MAG181
GCA_034658955.1ContigJAYEGF000000000SAMN38319650
MAG253
GCA_034717795.1ScaffoldJAYELY000000000SAMN38319501
MAG095
GCA_034722095.1ScaffoldJAYENM000000000SAMN38319461
MAG055
SRA Data Details
ParameterValue
Data volume, Gbases299
Data volume, Mbytes97200

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