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Accession: PRJNA1081682 ID: 1081682

Shotgun metagenomics analysis of microbial consotia with PS,PE, and PET biodegradation properties

Shotgun meta-genomics of plastics(PET, PE, and PS) degrading microorganisms from landfill soil, sea water, and cow dung
AccessionPRJNA1081682
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 28-Feb-2024
University of South Africa
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)212
SRA Experiments9
Other datasets
BioSample278
Assembly212
Assembly details:
Assembly levelNumber of Assemblies
207
5
212
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_044508265.1ScaffoldJBIQIB000000000SAMN43946604
mag.51e
GCA_044508085.1ScaffoldJBIQIK000000000SAMN43946613
mag.31e
GCA_044507255.1ScaffoldJBIQJU000000000SAMN43946649
mag.45f
GCA_044507065.1ScaffoldJBIQJY000000000SAMN43946653
mag.79f
GCA_044507795.1ScaffoldJBIQJA000000000SAMN43946629
mag.38f
GCA_044508335.1ScaffoldJBIQHY000000000SAMN43946601
mag.21e
GCA_040255965.1ScaffoldJBDZVY000000000SAMN41489593
PE_soil6
GCA_040255675.1ScaffoldJBDZVM000000000SAMN41489605
PE_dung18
GCA_044508135.1ScaffoldJBIQIH000000000SAMN43946610
mag.24e
GCA_044507265.1ScaffoldJBIQJT000000000SAMN43946648
mag.27f
GCA_044507605.1ScaffoldJBIQJI000000000SAMN43946637
mag.104f
GCA_040255725.1ScaffoldJBDZVK000000000SAMN41489607
PE_dung20
GCA_040255345.1ScaffoldJBDZUV000000000SAMN41489622
PE_seawater35
GCA_044507565.1ScaffoldJBIQJL000000000SAMN43946640
mag.10f
GCA_044507145.1ScaffoldJBIQJW000000000SAMN43946651
mag.77f
GCA_044506375.1ScaffoldJBIQKR000000000SAMN43946672
mag.95f
GCA_044508215.1ScaffoldJBIQID000000000SAMN43946606
mag.35e
GCA_044464625.1ScaffoldJBIQLC000000000SAMN43959868
mag.39g
GCA_044464485.1ScaffoldJBIQLG000000000SAMN43959872
mag.26g
GCA_044463785.1ScaffoldJBIQMA000000000SAMN43959893
mag.47g
GCA_044507725.1ScaffoldJBIQJC000000000SAMN43946631
mag.100f
GCA_044508625.1ScaffoldJBIQHJ000000000SAMN43946586
mag.34d
GCA_044464085.1ScaffoldJBIQLQ000000000SAMN43959883
mag.34g
GCA_040255155.1ScaffoldJBDZUL000000000SAMN41489632
PE_seawater45
GCA_040255885.1ScaffoldJBDZVW000000000SAMN41489595
PE_soil8
GCA_044508545.1ScaffoldJBIQHO000000000SAMN43946591
mag.15d
GCA_044463965.1ScaffoldJBIQLX000000000SAMN43959890
mag.25g
GCA_044463945.1ScaffoldJBIQLW000000000SAMN43959889
mag.1g
GCA_044463605.1ScaffoldJBIQME000000000SAMN43959897
mag.6g
GCA_044508645.1ScaffoldJBIQHG000000000SAMN43946583
mag.14d
GCA_044507665.1ScaffoldJBIQJG000000000SAMN43946635
mag.60f
GCA_044508095.1ScaffoldJBIQIJ000000000SAMN43946612
mag.46e
GCA_044507525.1ScaffoldJBIQJM000000000SAMN43946641
mag.9f
GCA_044464545.1ScaffoldJBIQLD000000000SAMN43959869
mag.35g
GCA_044462865.1ScaffoldJBIQMX000000000SAMN43959920
mag.4i
GCA_044463665.1ScaffoldJBIQMC000000000SAMN43959895
mag.16g
GCA_040255265.1ScaffoldJBDZUQ000000000SAMN41489627
PE_seawater40
GCA_044463745.1ScaffoldJBIQMB000000000SAMN43959894
mag.52g
GCA_044463345.1ScaffoldJBIQMM000000000SAMN43959909
mag.18h
GCA_044507205.1ScaffoldJBIQJV000000000SAMN43946650
mag.65f
GCA_044507415.1ScaffoldJBIQJQ000000000SAMN43946645
mag.75f
GCA_044506615.1ScaffoldJBIQKJ000000000SAMN43946664
mag.29f
GCA_044507845.1ScaffoldJBIQIW000000000SAMN43946625
mag.41e
GCA_044508575.1ScaffoldJBIQHM000000000SAMN43946589
mag.18d
GCA_044508495.1ScaffoldJBIQHP000000000SAMN43946592
mag.7d
GCA_044506455.1ScaffoldJBIQKO000000000SAMN43946669
mag.31f
GCA_044506685.1ScaffoldJBIQKI000000000SAMN43946663
mag.86f
GCA_044508595.1ScaffoldJBIQHK000000000SAMN43946587
mag.13d
GCA_044463585.1ScaffoldJBIQMI000000000SAMN43959902
mag.29h
GCA_044463085.1ScaffoldJBIQMT000000000SAMN43959916
mag.17i
GCA_044464825.1ScaffoldJBIQKX000000000SAMN43959863
mag.66g
GCA_044463105.1ScaffoldJBIQMR000000000SAMN43959914
mag.35h
GCA_040256005.1ScaffoldJBDZWC000000000SAMN41489589
PE_soil2
GCA_040255665.1ScaffoldJBDZVL000000000SAMN41489606
PE_dung19
GCA_040255585.1ScaffoldJBDZVI000000000SAMN41489609
PE_dung22
GCA_044508445.1ScaffoldJBIQHQ000000000SAMN43946593
mag.30d
GCA_044508425.1ScaffoldJBIQHT000000000SAMN43946596
mag.33d
GCA_044507975.1ScaffoldJBIQIQ000000000SAMN43946619
mag.9e
GCA_044506545.1ScaffoldJBIQKM000000000SAMN43946667
mag.83f
GCA_044506245.1ScaffoldJBIQKV000000000SAMN43946676
mag.44f
GCA_044507775.1ScaffoldJBIQIY000000000SAMN43946627
mag.88f
GCA_044507115.1ScaffoldJBIQJZ000000000SAMN43946654
mag.108f
GCA_044507815.1ScaffoldJBIQIX000000000SAMN43946626
mag.25f
GCA_044508195.1ScaffoldJBIQIC000000000SAMN43946605
mag.52e
GCA_044508845.1ScaffoldJBIQHC000000000SAMN43946579
mag.1d
GCA_040255325.1ScaffoldJBDZUS000000000SAMN41489625
PE_seawater38
GCA_044462585.1ScaffoldJBIQNH000000000SAMN43959930
mag.6i
GCA_044463245.1ScaffoldJBIQMO000000000SAMN43959911
mag.37h
GCA_044463985.1ScaffoldJBIQLU000000000SAMN43959887
mag.18g
GCA_044464355.1ScaffoldJBIQLK000000000SAMN43959876
mag.31g
GCA_044462605.1ScaffoldJBIQND000000000SAMN43959926
mag.23i
GCA_044508295.1ScaffoldJBIQHZ000000000SAMN43946602
mag.44e
GCA_044507625.1ScaffoldJBIQJE000000000SAMN43946633
mag.111f
GCA_044506255.1ScaffoldJBIQKW000000000SAMN43946677
mag.11f
GCA_040255365.1ScaffoldJBDZUY000000000SAMN41489619
PE_seawater32
GCA_040255825.1ScaffoldJBDZVS000000000SAMN41489599
PE_dung12
GCA_040255805.1ScaffoldJBDZVQ000000000SAMN41489601
PE_dung14
GCA_040255145.1ScaffoldJBDZUN000000000SAMN41489630
PE_seawater43
GCA_044507875.1ScaffoldJBIQIT000000000SAMN43946622
mag.40e
GCA_044507925.1ScaffoldJBIQIR000000000SAMN43946620
mag.16e
GCA_044508525.1ScaffoldJBIQHN000000000SAMN43946590
mag.40d
GCA_044506985.1ScaffoldJBIQKB000000000SAMN43946656
mag.52f
GCA_044506555.1ScaffoldJBIQKL000000000SAMN43946666
mag.15f
GCA_044506585.1ScaffoldJBIQKK000000000SAMN43946665
mag.2f
GCA_044506365.1ScaffoldJBIQKQ000000000SAMN43946671
mag.115f
GCA_040255305.1ScaffoldJBDZUT000000000SAMN41489624
PE_seawater37
GCA_044507695.1ScaffoldJBIQJD000000000SAMN43946632
mag.122f
GCA_040255375.1ScaffoldJBDZUW000000000SAMN41489621
PE_seawater34
GCA_044508555.1ScaffoldJBIQHL000000000SAMN43946588
mag.9d
GCA_044462545.1ScaffoldJBIQNF000000000SAMN43959928
mag.33i
GCA_044464395.1ScaffoldJBIQLI000000000SAMN43959874
mag.8g
GCA_040255405.1ScaffoldJBDZUX000000000SAMN41489620
PE_seawater33
GCA_040255835.1ScaffoldJBDZVT000000000SAMN41489598
PE_dung11
GCA_040255535.1ScaffoldJBDZVE000000000SAMN41489613
PE_dung26
GCA_044508065.1ScaffoldJBIQIL000000000SAMN43946614
mag.39e
GCA_044506405.1ScaffoldJBIQKP000000000SAMN43946670
mag.74f
GCA_044464005.1ScaffoldJBIQLV000000000SAMN43959888
mag.45g
GCA_044507445.1ScaffoldJBIQJO000000000SAMN43946643
mag.96f
GCA_044508325.1ScaffoldJBIQHX000000000SAMN43946600
mag.6e
GCA_040255525.1ScaffoldJBDZVD000000000SAMN41489614
PE_dung27
GCA_044508395.1ScaffoldJBIQHU000000000SAMN43946597
mag.6d
GCA_044464135.1ScaffoldJBIQLR000000000SAMN43959884
mag.67g
GCA_044464165.1ScaffoldJBIQLP000000000SAMN43959882
mag.23g
GCA_044462885.1ScaffoldJBIQMV000000000SAMN43959918
mag.20i
GCA_044462945.1ScaffoldJBIQMW000000000SAMN43959919
mag.14i
GCA_044464745.1ScaffoldJBIQKY000000000SAMN43959864
mag.33g
GCA_044464645.1ScaffoldJBIQLA000000000SAMN43959866
mag.38g
GCA_044462565.1ScaffoldJBIQNE000000000SAMN43959927
mag.11i
GCA_044508435.1ScaffoldJBIQHR000000000SAMN43946594
mag.16d
GCA_044508465.1ScaffoldJBIQHS000000000SAMN43946595
mag.38d
GCA_044507965.1ScaffoldJBIQIP000000000SAMN43946618
mag.27e
GCA_044506715.1ScaffoldJBIQKH000000000SAMN43946662
mag.4f
GCA_044506875.1ScaffoldJBIQKF000000000SAMN43946660
mag.76f
GCA_044507075.1ScaffoldJBIQKA000000000SAMN43946655
mag.101f
GCA_044508025.1ScaffoldJBIQIM000000000SAMN43946615
mag.25e
GCA_040255895.1ScaffoldJBDZVV000000000SAMN41489596
PE_soil9
GCA_044463185.1ScaffoldJBIQMQ000000000SAMN43959913
mag.36h
GCA_044463405.1ScaffoldJBIQML000000000SAMN43959908
mag.21h
GCA_040255635.1ScaffoldJBDZVJ000000000SAMN41489608
PE_dung21
GCA_040256045.1ScaffoldJBDZWD000000000SAMN41489588
PE_soil1
GCA_044508165.1ScaffoldJBIQIG000000000SAMN43946609
mag.36e
GCA_044508205.1ScaffoldJBIQIE000000000SAMN43946607
mag.45e
GCA_044508755.1ScaffoldJBIQHH000000000SAMN43946584
mag.35d
GCA_044507425.1ScaffoldJBIQJN000000000SAMN43946642
mag.67f
GCA_044507105.1ScaffoldJBIQJX000000000SAMN43946652
mag.112f
GCA_044508385.1ScaffoldJBIQHV000000000SAMN43946598
mag.26e
GCA_044507735.1ScaffoldJBIQJB000000000SAMN43946630
mag.109f
GCA_040255975.1ScaffoldJBDZWB000000000SAMN41489590
PE_soil3
GCA_040255245.1ScaffoldJBDZUP000000000SAMN41489628
PE_seawater41
GCA_044462785.1ScaffoldJBIQNB000000000SAMN43959924
mag.26i
GCA_044507885.1ScaffoldJBIQIS000000000SAMN43946621
mag.7e
GCA_044507505.1ScaffoldJBIQJP000000000SAMN43946644
mag.105f
GCA_040255845.1ScaffoldJBDZVU000000000SAMN41489597
PE_soil10
GCA_040255165.1ScaffoldJBDZUK000000000SAMN41489633
PE_seawater46
GCA_044464665.1ScaffoldJBIQLB000000000SAMN43959867
mag.32g
GCA_040255195.1ScaffoldJBDZUO000000000SAMN41489629
PE_seawater42
GCA_040255565.1ContigJBDZVH000000000SAMN41489610
PE_dung23
GCA_044507865.1ScaffoldJBIQIV000000000SAMN43946624
mag.22e
GCA_044507675.1ScaffoldJBIQJF000000000SAMN43946634
mag.19f
GCA_044463845.1ScaffoldJBIQLZ000000000SAMN43959892
mag.64g
GCA_044463565.1ScaffoldJBIQMG000000000SAMN43959899
mag.12h
GCA_040255475.1ScaffoldJBDZVC000000000SAMN41489615
PE_dung28
GCA_044508185.1ScaffoldJBIQIF000000000SAMN43946608
mag.50e
GCA_044508635.1ScaffoldJBIQHI000000000SAMN43946585
mag.23d
GCA_044507535.1ScaffoldJBIQJK000000000SAMN43946639
mag.87f
GCA_044507575.1ScaffoldJBIQJJ000000000SAMN43946638
mag.57f
GCA_044506435.1ScaffoldJBIQKS000000000SAMN43946673
mag.64f
GCA_044464175.1ScaffoldJBIQLO000000000SAMN43959881
mag.53g
GCA_040255445.1ScaffoldJBDZUZ000000000SAMN41489618
PE_seawater31
GCA_040255465.1ScaffoldJBDZVA000000000SAMN41489617
PE_seawater30
GCA_044506835.1ScaffoldJBIQKG000000000SAMN43946661
mag.35f
GCA_044508675.1ScaffoldJBIQHF000000000SAMN43946582
mag.8d
GCA_044508365.1ScaffoldJBIQHW000000000SAMN43946599
mag.42e
GCA_040255575.1ScaffoldJBDZVF000000000SAMN41489612
PE_dung25
GCA_044462905.1ScaffoldJBIQMZ000000000SAMN43959922
mag.16i
GCA_044464285.1ScaffoldJBIQLS000000000SAMN43959885
mag.63g
GCA_044464525.1ScaffoldJBIQLE000000000SAMN43959870
mag.51g
GCA_044464765.1ScaffoldJBIQKZ000000000SAMN43959865
mag.7g
GCA_044462755.1ScaffoldJBIQNA000000000SAMN43959923
mag.28i
GCA_044462425.1ContigJBIQNK000000000SAMN43959933
mag.31i
GCA_044462405.1ScaffoldJBIQNL000000000SAMN43959934
mag.8i
GCA_044464225.1ScaffoldJBIQLN000000000SAMN43959879
mag.37g
GCA_044463365.1ScaffoldJBIQMK000000000SAMN43959906
mag.23h
GCA_044463465.1ScaffoldJBIQMH000000000SAMN43959901
mag.28h
GCA_044505245.1ScaffoldJBIQNI000000000SAMN43959931
mag.27i
GCA_044462715.1ScaffoldJBIQMY000000000SAMN43959921
mag.19i
GCA_044464385.1ScaffoldJBIQLM000000000SAMN43959878
mag.30g
GCA_040255215.1ScaffoldJBDZUM000000000SAMN41489631
PE_seawater44
GCA_040255495.1ScaffoldJBDZVB000000000SAMN41489616
PE_dung29
GCA_044508005.1ScaffoldJBIQIO000000000SAMN43946617
mag.43e
GCA_044507635.1ScaffoldJBIQJH000000000SAMN43946636
mag.123f
GCA_044507895.1ScaffoldJBIQIU000000000SAMN43946623
mag.10e
GCA_044507405.1ScaffoldJBIQJS000000000SAMN43946647
mag.3f
GCA_044506225.1ScaffoldJBIQKU000000000SAMN43946675
mag.68f
GCA_044508835.1ScaffoldJBIQHD000000000SAMN43946580
mag.36d
GCA_044463445.1ScaffoldJBIQMJ000000000SAMN43959905
mag.13h
GCA_044463545.1ScaffoldJBIQMF000000000SAMN43959898
mag.17g
GCA_044464425.1ScaffoldJBIQLL000000000SAMN43959877
mag.14g
GCA_040255945.1ScaffoldJBDZVZ000000000SAMN41489592
PE_soil5
GCA_040255715.1ScaffoldJBDZVN000000000SAMN41489604
PE_dung17
GCA_040255955.1ScaffoldJBDZWA000000000SAMN41489591
PE_soil4
GCA_040255785.1ContigJBDZVR000000000SAMN41489600
PE_dung13
GCA_040255765.1ScaffoldJBDZVP000000000SAMN41489602
PE_dung15
GCA_040255385.1ScaffoldJBDZUU000000000SAMN41489623
PE_seawater36
GCA_044508875.1ScaffoldJBIQHE000000000SAMN43946581
mag.37d
GCA_044506565.1ScaffoldJBIQKN000000000SAMN43946668
mag.14f
GCA_044506885.1ScaffoldJBIQKC000000000SAMN43946657
mag.22f
GCA_044507765.1ScaffoldJBIQIZ000000000SAMN43946628
mag.72f
GCA_044508015.1ScaffoldJBIQIN000000000SAMN43946616
mag.32e
GCA_044508285.1ScaffoldJBIQIA000000000SAMN43946603
mag.20e
GCA_044463265.1ScaffoldJBIQMN000000000SAMN43959910
mag.38h
GCA_044463025.1ScaffoldJBIQMU000000000SAMN43959917
mag.21i
GCA_044464495.1ScaffoldJBIQLH000000000SAMN43959873
mag.41g
GCA_044506825.1ScaffoldJBIQKE000000000SAMN43946659
mag.42f
GCA_040255255.1ScaffoldJBDZUR000000000SAMN41489626
PE_seawater39
GCA_044463125.1ScaffoldJBIQMS000000000SAMN43959915
mag.29i
GCA_044463205.1ScaffoldJBIQMP000000000SAMN43959912
mag.3h
GCA_044464585.1ScaffoldJBIQLF000000000SAMN43959871
mag.54g
GCA_044506205.1ScaffoldJBIQKT000000000SAMN43946674
mag.51f
GCA_040255925.1ScaffoldJBDZVX000000000SAMN41489594
PE_soil7
GCA_040255705.1ScaffoldJBDZVO000000000SAMN41489603
PE_dung16
GCA_044463765.1ScaffoldJBIQNG000000000SAMN43959929
mag.35i
GCA_044463725.1ScaffoldJBIQMD000000000SAMN43959896
mag.65g
GCA_044463905.1ScaffoldJBIQLY000000000SAMN43959891
mag.42g
GCA_044464065.1ScaffoldJBIQLT000000000SAMN43959886
mag.13g
GCA_044462445.1ScaffoldJBIQNJ000000000SAMN43959932
mag.24i
GCA_040255595.1ScaffoldJBDZVG000000000SAMN41489611
PE_dung24
GCA_044464345.1ScaffoldJBIQLJ000000000SAMN43959875
mag.2g
GCA_044462705.1ScaffoldJBIQNC000000000SAMN43959925
mag.1i
GCA_044506935.1ContigJBIQKD000000000SAMN43946658
mag.114f
GCA_044507285.1ScaffoldJBIQJR000000000SAMN43946646
mag.102f
GCA_044508115.1ContigJBIQII000000000SAMN43946611
mag.29e
SRA Data Details
ParameterValue
Data volume, Gbases65
Data volume, Mbytes38796

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