Seven fish species (three sharks, one ray, and thr... (ID 313962) - BioProject

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Accession: PRJNA313962 ID: 313962

Seven fish species (three sharks, one ray, and three teleost fish)

RNA-seq of heart tissue from 7 fish species, including four elasmobranchs (white shark, shortfin mako, great hammerhead, and yellow stingray) and three teleost species (swordfish, hogfish, and ocean surgeonfish) Raw sequence reads

RNA-seq was conducted on heart tissue from white shark (Carcharodon carcharias), shortfin mako (Isurus oxyrinchus), great hammerhead (Sphyrna mokarran), yellow stingray (Urobatis jamaicensis), swordfish (Xiphias gladius), hogfish (Lachnolaimus maximus), and ocean surgeonfish (Acanthurus bahianus). More...

Accession	PRJNA313962
Data Type	Raw sequence reads, Transcriptome or Gene expression
Scope	Multispecies
Publications	Marra NJ et al., "Comparative transcriptomics of elasmobranchs and teleosts highlight important processes in adaptive immunity and regional endothermy.", BMC Genomics, 2017 Jan 30;18(1):87
Submission	Registration date: 1-Mar-2016 Cornell University
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	7
Publications
PubMed	1
PMC	1
Other datasets
BioSample	7

SRA Data Details

Parameter	Value
Data volume, Gbases	61
Data volume, Mbytes	37317

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Seven fish species (three sharks, one ray, and three teleost fish)

RNA-seq of heart tissue from 7 fish species, including four elasmobranchs (white shark, shortfin mako, great hammerhead, and yellow stingray) and three teleost species (swordfish, hogfish, and ocean surgeonfish) Raw sequence reads

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