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Genome Information for Bacillus subtilis
To identify the substrates of YacP (Rae1) by determine which RNAs are affected in a ∆yacP mutant and plasmid complemented strain
Overall design: 4 strains were sequenced in triplicate: SSB1002 (W168 wild-type), CCB375 (W168 ∆yacP), CCB604 (W168 ∆yacP + pDG-yacP) + IPTG, CCB604 (W168 ∆yacP + pDG-yacP) - IPTG
| Accession | PRJNA362730; GEO: GSE93894 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Bacillus subtilis[Taxonomy ID: 1423] Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis |
| Publications | Leroy M et al., "Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis.", EMBO J, 2017 May 2;36(9):1167-1181 |
| Submission | Registration date: 20-Jan-2017
Institut de Biologie Physico-Chimique, UMR8261, CNRS |
| Relevance | Environmental |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 12 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 12 |
| GEO DataSets | 1 |