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Accession: PRJNA343219 ID: 343219

bioreactor sludge metagenome

lab-scale anammox bioreactor Metagenome

5L continuously fed sequencing batch reactor operated to treat high strength ammonia wastewater via anaerobic ammonium oxidation (anammox). More...

Accession	PRJNA343219
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	bioreactor sludge metagenome[Taxonomy ID: 412754] unclassified sequences; metagenomes; ecological metagenomes; bioreactor sludge metagenome
Publications (total 3) Less...	Lawson CE et al., "Metabolic network analysis reveals microbial community interactions in anammox granules.", Nat Commun, 2017 May 31;8:15416 More... Lawson CE et al., "Metabolic network analysis reveals microbial community interactions in anammox granules.", Nat Commun, 2017 May 31;8:15416 Bhattacharjee AS et al., "Whole-Community Metagenomics in Two Different Anammox Configurations: Process Performance and Community Structure.", Environ Sci Technol, 2017 Apr 18;51(8):4317-4327 Kotay SM et al., "Anaerobic ammonia oxidation (ANAMMOX) for side-stream treatment of anaerobic digester filtrate process performance and microbiology.", Biotechnol Bioeng, 2013 Apr;110(4):1180-92 Less...
Grants	CBET-1435661 , National Science Foundation MCB-1518130, National Science Foundation
Submission	Registration date: 20-Mar-2017 University of Wisconsin - Madison
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3470
WGS master	15
SRA Experiments	4
Protein Sequences	42887
Publications
PubMed	3
PMC	2
Other datasets
BioSample	19
Assembly	15

Genome assemblies, organelles and plasmids:

Assembly GCA_002050085.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSY00000000

Assembly GCA_002050095.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSR00000000

Assembly GCA_002050125.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWTA00000000

Assembly GCA_002050155.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSU00000000

Assembly GCA_002050165.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSW00000000

Assembly GCA_002050195.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSZ00000000

Assembly GCA_002050205.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWTD00000000

Assembly GCA_002050235.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWST00000000

Assembly GCA_002050245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSX00000000

Assembly GCA_002050275.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWTB00000000

Assembly GCA_002050295.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSV00000000

Assembly GCA_002050315.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWTE00000000

Assembly GCA_002050325.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWTF00000000

Assembly GCA_002066955.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWSS00000000

Assembly GCA_002066995.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MWTC00000000

SRA Data Details

Parameter	Value
Data volume, Gbases	22
Data volume, Mbytes	12640

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Protein
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PubMed
PubMed Links
SRA
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Taxonomy
Taxonomy Links
WGS master
Link to WGS master record(s)

LinkOut to external resources

2775506823: Polyangiaceae bacterium UTPRO1 [Integrated Microbial Genomes]
2775506823: Polyangiaceae bacterium UTPRO1
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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BioProject Links for BioSample (Select 6342765) (1)
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bioreactor sludge metagenome
bioreactor sludge metagenome
lab-scale anammox bioreactor Metagenome

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