marine metagenome (ID 249643) - BioProject

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Accession: PRJNA249643 ID: 249643

marine metagenome

Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 Metagenome

Metagenomic analysis of microbial communities associated with natural oils that seep into the Santa Barbara Channel: creating a mechanistic model for biological hydrocarbon-degradation.

Accession	PRJNA249643
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Submission	Registration date: 6-Jul-2017 DOE Joint Genome Institute
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	496
WGS master	3
SRA Experiments	1
Protein Sequences	4021
Other datasets
BioSample	5
Assembly	3

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

3
3

Assembly	WGS	BioSample	Taxonomy
GCA_002215665.1	NGFL00000000	SAMN06887667	candidate division TA06 bacterium JGI_Cruoil_03_38_101
GCA_002245405.1	NOZQ00000000	SAMN06887669	candidate division WOR-3 bacterium JGI_Cruoil_03_44_89
GCA_002245415.1	NOZP00000000	SAMN06887668	candidate division WOR-3 bacterium JGI_Cruoil_03_51_56

SRA Data Details

Parameter	Value
Data volume, Gbases	54
Data volume, Mbytes	37453

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LinkOut to external resources

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GOLD: Gp0057569
Genomes On Line Database
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8109299269: Candidatus Methanolliviera archaeon NM1b
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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marine metagenome
marine metagenome
Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 Metagenome

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