marine metagenome (ID 391943) - BioProject

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Accession: PRJNA391943 ID: 391943

marine metagenome

The reconstruction of draft metagenome-assembled genomes from the global oceans.

Utilizing the available metagenomic data from the Tara Oceans global expedition, we have used current assembly and binning techniques to reconstruct draft metagenome-assembled bacterial and archaeal genomes, with an estimated completion of ≥50%

Accession	PRJNA391943
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications	Tully BJ et al., "The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans.", Sci Data, 2018 Jan 16;5:170203 Published online: "The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans.", Scientific data, 5:170203
Grants	"Center for Dark Energy Biosphere Investigations" (Grant ID OCE-0939654, National Science Foundation)
Submission	Registration date: 18-Oct-2017 - University of Southern California - Tara Oceans Consortium
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3763
WGS master	2307
Protein Sequences	27131
Publications
PubMed	1
PMC	1
Other datasets
BioSample	2549
Assembly	2307

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

8
8

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_002701865.2	NZWH00000000	SAMN07618385	NAT510	bacterium
GCA_002708105.2	PAOQ00000000	SAMN07618396	SAT211	bacterium
GCA_002697665.2	NZXA00000000	SAMN07618382	NAT430	bacterium
GCA_002712365.2	PATK00000000	SAMN07618395	SAT1607	bacterium
GCA_002715585.2	PAZJ00000000	SAMN07618405	SP78	bacterium
GCA_002696425.2	NZTL00000000	SAMN07618381	EAC113	bacterium
GCA_002701605.2	NZWF00000000	SAMN07618386	NAT53	bacterium
GCA_002701925.2	NZWJ00000000	SAMN07618384	NAT509	bacterium

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marine metagenome

The reconstruction of draft metagenome-assembled genomes from the global oceans.

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