marine sediment metagenome (ID 434806) - BioProject

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Accession: PRJNA434806 ID: 434806

marine sediment metagenome

Oil-degrading bacteria from deep-sea sediment

We investigated the oil degradation potential and changes in bacterial community by amending seafloor sediment collected near the DWH site with crude oil and both oil and Corexit dispersant. More...

Accession	PRJNA434806
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Publications	Bacosa HP et al., "Hydrocarbon degradation and response of seafloor sediment bacterial community in the northern Gulf of Mexico to light Louisiana sweet crude oil.", ISME J, 2018 Oct;12(10):2532-2543
Submission	Registration date: 17-Jul-2018 Dispersion Research on Oil; Physics and Plankton Studies - Texas A&M University at Galveston
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1176
WGS master	7
Publications
PubMed	1
PMC	1
Other datasets
BioSample	8
Assembly	7

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

7
7

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_003325925.1	PYXN00000000	SAMN08581018	bin6	Alteromonadales bacterium
GCA_003325885.1	PYXL00000000	SAMN08581020	bin17	Candidatus Methylomirabilota bacterium
GCA_003325815.1	PYXH00000000	SAMN08581024	bin21	Colwellia sp.
GCA_003325785.1	PYXI00000000	SAMN08581023	bin20	Colwellia sp.
GCA_003325875.1	PYXJ00000000	SAMN08581022	bin19	Paracoccaceae bacterium
GCA_003325865.1	PYXM00000000	SAMN08581019	bin8	Woeseia sp.
GCA_003325835.1	PYXK00000000	SAMN08581021	bin18	bacterium

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marine sediment metagenome

Oil-degrading bacteria from deep-sea sediment

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