BioProject

For CG2v2.0 sequencing and assembly: Genomic DNA purified from a CG2 clonal zebrafish was sequenced using an Illumina HiSeq2500 instrument, yielding ~ 80 Gb of 2 x 250 paired-end reads, and ~ 60 x coverage. More...

For CG2v2.0 sequencing and assembly: Genomic DNA purified from a CG2 clonal zebrafish was sequenced using an Illumina HiSeq2500 instrument, yielding ~ 80 Gb of 2 x 250 paired-end reads, and ~ 60 x coverage. The de novo assembly was generated using Discovar de novo. For CG2v1.0 sequencing and assembly: Genomic DNA purified from a whole CG2 clonal zebrafish was sequenced using an Illumina HiSeq2500 (yielding 38 Gb of 2 x 100 paired-end reads with approximately 25 x sequence coverage). Illumina adapters were removed using SeqPrep v1.1. Reads were filtered for quality with Trimmomatic v0.3, and read quality was assessed using FastQC. The de novo assembly was generated using SOAPdenovo2. Less...