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Accession: PRJNA454110 ID: 454110

Danio rerio strain:CG1 (zebrafish)

Danio rerio JD29 strain CG1 genome sequencing and assembly

See Genome Information for Danio rerio
Genomic DNA purified from a CG1 clonal zebrafish was sequenced using an Illumina HiSeq2500 instrument, yielding ~ 65 Gb of 2 x 250 paired-end reads, and ~ 50 x coverage.
AccessionPRJNA454110
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismDanio rerio[Taxonomy ID: 7955]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio; Danio rerio
Grants
  • "Uncovering diversity of the vertebrate immune system through genomic sequencing of clonal zebrafish lines" (Grant ID PDR-0260, Chicago Biomedical Consortium)
SubmissionRegistration date: 5-Oct-2022
University of Chicago
RelevanceModel Organism
Locus Tag PrefixDD540
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2
WGS master1
SRA Experiments1
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases65
Data volume, Mbytes31724

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