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Accession: PRJNA356693 ID: 356693

aquatic metagenome

Uncultured Chloroflexi Genomic Bins Metagenomic assembly

This bioproject contains reconstructed genomic bins belonging to the uncultured representatives of the phylum Chloroflexi. More...
AccessionPRJNA356693
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismaquatic metagenome[Taxonomy ID: 1169740]
unclassified sequences; metagenomes; ecological metagenomes; aquatic metagenome
PublicationsMehrshad M et al., "The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling.", ISME J, 2018 Mar;12(3):655-668
SubmissionRegistration date: 8-Dec-2017
Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1330
WGS master31
Protein Sequences29491
Publications
PubMed1
PMC1
Other datasets
BioSample31
Assembly31
Assembly details:
Assembly levelNumber of Assemblies
31
31
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_009391875.1ContigQWJH00000000SAMN09724371
Casp150-chloro-G12
GCA_009391845.1ContigQWJG00000000SAMN09724372
Casp150-chloro-G14
GCA_009391835.1ContigQWJF00000000SAMN09724373
Casp150-chloro-G5
GCA_009391795.1ContigQWJE00000000SAMN09724374
Casp150-chloro-G9
GCA_009391785.1ContigQWJD00000000SAMN09724375
Casp40-chloro-G10
GCA_009391775.1ContigQWJC00000000SAMN09724376
Casp40-chloro-G14
GCA_009391735.1ContigQWJA00000000SAMN09724378
Casp40-chloro-G4
GCA_009391745.1ContigQWJB00000000SAMN09724377
Casp40-chloro-G2
GCA_009391695.1ContigQWIY00000000SAMN09724380
Casp40-chloro-G9
GCA_009391705.1ContigQWIZ00000000SAMN09724379
Casp40-chloro-G5
GCA_002816395.1ContigMUCL00000000SAMN06121234
Ae2-Chloro-G1
GCA_002816925.1ContigMUCM00000000SAMN06121235
Ae2-Chloro-G2
GCA_002816945.1ContigMUCN00000000SAMN06121236
Ae2-Chloro-G3
GCA_002816325.1ContigMUCH00000000SAMN06121169
Casp-Chloro-G1
GCA_002816575.1ContigMUCI00000000SAMN06121170
Casp-Chloro-G2
GCA_002816715.1ContigMUCJ00000000SAMN06121171
Casp-Chloro-G3
GCA_002816705.1ContigMUCK00000000SAMN06121187
Casp-Chloro-G4
GCA_002816375.1ContigMUCO00000000SAMN06121237
Io17-Chloro-G1
GCA_002816875.1ContigMUCP00000000SAMN06121238
Io17-Chloro-G2
GCA_002816985.1ContigMUCQ00000000SAMN06121239
Io17-Chloro-G3
GCA_002816455.1ContigMUCR00000000SAMN06121240
Io17-Chloro-G4
GCA_002816355.1ContigMUCS00000000SAMN06121264
Io17-Chloro-G5
GCA_002816585.1ContigMUCT00000000SAMN06121288
Io17-Chloro-G6
GCA_002817055.1ContigMUCU00000000SAMN06121290
Io17-Chloro-G7
GCA_002817135.1ContigMUCV00000000SAMN06121291
Io17-Chloro-G8
GCA_002816675.1ContigMUCW00000000SAMN06121322
Io17-Chloro-G9
GCA_002817285.1ContigMUDB00000000SAMN06121367
MP-NPac-SRR3961935-G1
GCA_002817125.1ContigMUCX00000000SAMN06121323
MP-SAtl-SRR3965592-G1
GCA_002817175.1ContigMUCY00000000SAMN06121325
MP-SAtl-SRR3965592-G2
GCA_002817235.1ContigMUCZ00000000SAMN06121365
MP-SInd-SRR3963457-G1
GCA_002816735.1ContigMUDA00000000SAMN06121366
MP-SInd-SRR3963457-G2

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