DNA Zoo (ID 512907) - BioProject

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Accession: PRJNA512907 ID: 512907

DNA Zoo

See Genome Information for Panthera onca

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This project is a component of the Earth BioGenome Project (EBP)

This project is a component of the DNA Zoo

This project is a component of the Oz Mammals Genomics (OMG)

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39 additional projects are components of the Earth BioGenome Project (EBP).

2 additional projects are components of the DNA Zoo.

5 additional projects are components of the Oz Mammals Genomics (OMG).

4 additional projects are related by organism.

The DNA Zoo is a consortium focused on facilitating conservation efforts through the rapid generation and release of high-quality genomics resources.

Accession	PRJNA512907
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Moreno J et al., "Emx2 underlies the development and evolution of marsupial gliding membranes", Nature, 2024;629(8010):127-135
Submission	Registration date: 3-Jan-2019 DNA Zoo - Baylor College of Medicine
Related Resources	DNA Zoo Consortium website DNA Zoo Twitter account page

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1140
WGS master	51
SRA Experiments	1487
Other datasets
BioSample	510
GEO DataSets	3
Assembly	51

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Total

51
51

Assembly	WGS	Chrs	BioSample	Taxonomy
GCA_028646355.1	JAQQSM000000000	18	SAMN21582225	Arctocephalus townsendi
GCA_028533215.1	JAPYYC000000000	19	SAMN21582226	Babyrousa celebensis
GCA_028627265.1	JAQQSH000000000	36	SAMN25565059	Cercopithecus mitis
GCA_028533335.1	JAQIGB000000000	38	SAMN16895755	Chrysocyon brachyurus
GCA_028534165.1	JAPYYN000000000	37	SAMN13072004	Coendou prehensilis
GCA_028646485.1	JAQQST000000000	21	SAMN14122058	Cryptoprocta ferox
GCA_028643805.1	JAQQSI000000000	7	SAMN23245409	Dasyurus viverrinus
GCA_028533375.1	JAQIGC000000000	42	SAMN15801452	Diceros bicornis
GCA_028627145.1	JAQQSQ000000000	17	SAMN16895756	Eidolon dupreanum
GCA_028534055.1	JAPYYL000000000	30	SAMN14122068	Eulemur mongoz
GCA_028533295.1	JAPYYG000000000	19	SAMN16895758	Felis nigripes
GCA_028646425.1	JAQQSP000000000	22	SAMN16895759	Grampus griseus
GCA_028533245.1	JAPYYF000000000	37	SAMN16895761	Helarctos malayanus
GCA_015741225.1	JADBBS000000000	33	SAMN15801460	Hydrochoerus hydrochaeris
GCA_028533205.1	JAPYYB000000000	10	SAMN21582244	Lagorchestes hirsutus
GCA_028534125.1	JAPYYK000000000	37	SAMN14122070	Lama glama
GCA_028533165.1	JAPYYA000000000	23	SAMN21582245	Leontopithecus rosalia
GCA_028583105.1	JAQMYV000000000	8	SAMN10973728	Macropus fuliginosus
GCA_028627215.1	JAQQTA000000000	8	SAMN10973729	Macropus giganteus
GCA_028551445.1	JAPYXX000000000	27	SAMN29758772	Miopithecus talapoin
GCA_021288785.3	JAJSZF000000000	17	SAMN13072016	Mirounga angustirostris
GCA_028533875.1	JAPYXW000000000	18	SAMN29758773	Mungos mungo
GCA_028533885.1	JAPYYJ000000000	19	SAMN14122072	Nasua narica
GCA_028658305.1	JAQQSO000000000	27	SAMN16895770	Pachyuromys duprasi
GCA_028533385.1	JAQIGD000000000	19	SAMN14122073	Panthera onca
GCA_028646445.1	JAQQSR000000000	19	SAMN15801464	Panthera uncia
GCA_028645565.1	JAQQSL000000000	21	SAMN21582254	Papio papio
GCA_028646595.1	JAQQSZ000000000	7	SAMN10973747	Phalanger gymnotis
GCA_028551515.1	JAPYXZ000000000	24	SAMN21582257	Pithecia pithecia
GCA_028658325.1	JAQQSK000000000	7	SAMN21582258	Potorous gilbertii
GCA_028534135.1	JAPYYM000000000	19	SAMN13072023	Potos flavus
GCA_028551425.1	JAQIGA000000000	19	SAMN21582259	Prionailurus viverrinus
GCA_028646535.1	JAQQSY000000000	19	SAMN10973748	Procyon lotor
GCA_028646575.1	JAQQSW000000000	10	SAMN13072024	Pseudocheirus occidentalis
GCA_028646515.1	JAQQSV000000000	8	SAMN13072025	Pseudochirops corinnae
GCA_028627135.1	JAQQSU000000000	5	SAMN13072026	Pseudochirops cupreus
GCA_028533765.1	JAPYYI000000000	19	SAMN14122077	Pteropus rufus
GCA_028646465.1	JAQQSS000000000	41	SAMN14122078	Rhinoceros unicornis
GCA_028533395.1	JAPYYH000000000	18	SAMN14122079	Rousettus madagascariensis
GCA_028643795.1	JAQQSG000000000	20	SAMN25565070	Sciurus carolinensis
GCA_028646385.1	JAQQSN000000000	22	SAMN16895774	Steno bredanensis
GCA_015711505.1	JADBBT000000000	24	SAMN15801470	Sylvilagus bachmani
GCA_028642525.1	JAQQSF000000000	25	SAMN29758779	Symphalangus syndactylus
GCA_028533255.1	JAPYYE000000000	40	SAMN16895775	Tapirus terrestris
GCA_028533075.1	JAQIFZ000000000	21	SAMN29758783	Theropithecus gelada
GCA_028533065.1	JAPYXV000000000	15	SAMN29758784	Trachops cirrhosus
GCA_028551375.1	JAPYXY000000000	26	SAMN21582271	Tremarctos ornatus
GCA_028551405.1	JAPYYD000000000	23	SAMN16895776	Uromys caudimaculatus
GCA_028533085.1	JAQIFY000000000	22	SAMN29758785	Varecia variegata
GCA_028626985.1	JAQQSX000000000	7	SAMN10973772	Vombatus ursinus
GCA_028644305.1	JAQQSJ000000000	19	SAMN21582272	Xerus rutilus

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	161040

SRA Data Details

Parameter	Value
Data volume, Gbases	66,107
Data volume, Tbytes	23.87

Related RefSeq Projects

PRJNA795490 : Mirounga angustirostris RefSeq Genome sequencing and assembly
PRJNA1028623 : Pantheraonca RefSeq Genome

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