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Genome Information for Homo sapiens
Tumor epithelium and surrounding stromal cells were isolated using laser capture microdissection of human breast cancer to examine differences in gene expression based on tissue types from inflammatory and non-inflammatory breast cancer
Keywords: LCM
Overall design: We applied LCM to obtain samples enriched in tumor epithelium and stroma from 15 IBC and 35 non-IBC cases to study the relative contribution of each component to the IBC phenotype and to patient survival.
| Accession | PRJNA97251; GEO: GSE5847 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications (total 3) Less... | - Glynn SA et al., "Increased NOS2 predicts poor survival in estrogen receptor-negative breast cancer patients.", J Clin Invest, 2010 Nov;120(11):3843-54
More...- Glynn SA et al., "Increased NOS2 predicts poor survival in estrogen receptor-negative breast cancer patients.", J Clin Invest, 2010 Nov;120(11):3843-54
- Martin DN et al., "Differences in the tumor microenvironment between African-American and European-American breast cancer patients.", PLoS One, 2009;4(2):e4531
- Boersma BJ et al., "A stromal gene signature associated with inflammatory breast cancer.", Int J Cancer, 2008 Mar 15;122(6):1324-32
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| Submission | Registration date: 15-Sep-2006
LHC, NCI |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Publications |
| PubMed | 3 |
| PMC | 2 |
| Other datasets |
| GEO DataSets | 3 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 2116885 |
| Data volume, Processed Mbytes | 47 |
| Data volume, Supplementary Mbytes | 320 |