viral metagenome (ID 317740) - BioProject

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Accession: PRJDB3979 ID: 317740

viral metagenome

Metagenomic analyses of the RNA viral communities in a diatom colony

We performed metagenomic analyses for RNA viral community by targeting long dsRNA in cellular organisms, a hallmark of infection or replication of both dsRNA and ssRNA viruses except for retroviruses. More...

Accession	PRJDB3979
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	viral metagenome[Taxonomy ID: 1070528] unclassified sequences; metagenomes; organismal metagenomes; viral metagenome
Publications	Urayama S et al., "FLDS: A Comprehensive dsRNA Sequencing Method for Intracellular RNA Virus Surveillance.", Microbes Environ, 2016;31(1):33-40
Grants	"Grant-in-Aid for Research Activity Start-up" (Grant ID 26892031, Grants-in-Aid for Scientific Research)
Submission	Registration date: 7-Apr-2016 Marine Functional Biology Group, Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology
Relevance	Environmental
Locus Tag Prefix	RVD

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	66
WGS master	1
Genomic RNA	65
SRA Experiments	20
Protein Sequences	105
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	23

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_018327785.1	Contig	BNHM00000000	SAMD00034184	viral metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	18
Data volume, Mbytes	9770

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viral metagenome

Metagenomic analyses of the RNA viral communities in a diatom colony

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