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Accession: PRJNA289734 ID: 289734

marine metagenome

Red Sea metagenomes

An expedition spanning nearly the entire eastern Red Sea. We sampled at eight stations along this route, sampling from the surface down to 500m.
AccessionPRJNA289734
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmarine metagenome[Taxonomy ID: 408172]
unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications (total 3)
  • Zhang Y et al., "Discovery of bioactive microbial gene products in inflammatory bowel disease.", Nature, 2022 Jun;606(7915):754-760
More...
SubmissionRegistration date: 22-Apr-2016
King Abdullah University of Science and Technology
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)27882
WGS master181
SRA Experiments45
Publications
PubMed3
PMC3
Other datasets
BioSample191
Assembly181
Assembly details:
Assembly levelNumber of Assemblies
170
11
181
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_001628605.1ScaffoldLUMX00000000SAMN04534547
REDSEA-S09_B7
GCA_001628595.1ScaffoldLUMY00000000SAMN04534548
REDSEA-S14_B4
GCA_001628575.1ContigLUMZ00000000SAMN04534549
REDSEA-S20_B6
GCA_001626125.1ScaffoldLUNA00000000SAMN04534550
REDSEA-S21_B10
GCA_001626165.1ScaffoldLUNB00000000SAMN04534551
REDSEA-S33_B8N9
GCA_001626205.1ScaffoldLUNC00000000SAMN04534552
REDSEA-S21_B14
GCA_001626195.1ScaffoldLUND00000000SAMN04534553
REDSEA-S36_B12
GCA_001626145.1ScaffoldLUNF00000000SAMN04534555
REDSEA-S32_B7
GCA_001626245.1ScaffoldLUNG00000000SAMN04534556
REDSEA-S35_B1
GCA_001628525.1ScaffoldLUNH00000000SAMN04534557
REDSEA-S38_B2
GCA_001628515.1ScaffoldLUNI00000000SAMN04534558
REDSEA-S42_B4
GCA_001626295.1ScaffoldLUNJ00000000SAMN04534559
REDSEA-S44_B1
GCA_001626275.1ScaffoldLUNK00000000SAMN04534560
REDSEA-S09_B2
GCA_001626355.1ScaffoldLUNL00000000SAMN04534561
REDSEA-S10_B9
GCA_001626335.1ScaffoldLUNM00000000SAMN04534562
REDSEA-S12_B5
GCA_001626315.1ScaffoldLUNN00000000SAMN04534563
REDSEA-S14_B11
GCA_001626115.1ScaffoldLUNO00000000SAMN04534564
REDSEA-S15_B11
GCA_001626655.1ScaffoldLUOC00000000SAMN04534578
REDSEA-S14_B6
GCA_001626685.1ScaffoldLUOD00000000SAMN04534579
REDSEA-S15_B10
GCA_001626675.1ScaffoldLUOE00000000SAMN04534580
REDSEA-S15_B13
GCA_001626725.1ScaffoldLUOF00000000SAMN04534581
REDSEA-S27_B1N12
GCA_001626755.1ScaffoldLUOG00000000SAMN04534582
REDSEA-S33_B13
GCA_001626845.1ScaffoldLUOH00000000SAMN04534583
REDSEA-S38_B13
GCA_001626695.1ContigLUOI00000000SAMN04534584
REDSEA-S39_B11
GCA_001626875.1ContigLUOJ00000000SAMN04534585
REDSEA-S39_B7
GCA_001628345.1ScaffoldLURM00000000SAMN04534667
REDSEA-S03_B1
GCA_001628405.1ScaffoldLURN00000000SAMN04534668
REDSEA-S12_B1
GCA_001628365.1ScaffoldLURO00000000SAMN04534669
REDSEA-S14_B12
GCA_001626465.1ScaffoldLUNP00000000SAMN04534565
REDSEA-S22_B4
GCA_001626415.1ScaffoldLUNQ00000000SAMN04534566
REDSEA-S28_B2
GCA_001626435.1ScaffoldLUNR00000000SAMN04534567
REDSEA-S34_B3
GCA_001626455.1ScaffoldLUNS00000000SAMN04534568
REDSEA-S36_B6
GCA_001626365.1ScaffoldLUNT00000000SAMN04534569
REDSEA-S37_B3
GCA_001626395.1ScaffoldLUNU00000000SAMN04534570
REDSEA-S40_B1
GCA_001626495.1ScaffoldLUNV00000000SAMN04534571
REDSEA-S41_B1
GCA_001626545.1ScaffoldLUNW00000000SAMN04534572
REDSEA-S42_B5
GCA_001626515.1ScaffoldLUNX00000000SAMN04534573
REDSEA-S43_B2
GCA_001626595.1ScaffoldLUNY00000000SAMN04534574
REDSEA-S45_B7
GCA_001629325.1ScaffoldLUSB00000000SAMN04534682
REDSEA-S03_B5
GCA_001629315.1ScaffoldLUSC00000000SAMN04534683
REDSEA-S08_B8
GCA_001629355.1ScaffoldLUSD00000000SAMN04534684
REDSEA-S09_B13
GCA_001629365.1ScaffoldLUSE00000000SAMN04534685
REDSEA-S12_B4
GCA_001629415.1ScaffoldLUSF00000000SAMN04534686
REDSEA-S14_B7
GCA_001629395.1ScaffoldLUSG00000000SAMN04534687
REDSEA-S15_B12
GCA_001629445.1ScaffoldLUSH00000000SAMN04534688
REDSEA-S21_B8
GCA_001629515.1ScaffoldLUSI00000000SAMN04534689
REDSEA-S26_B10
GCA_001629435.1ScaffoldLUSJ00000000SAMN04534690
REDSEA-S27_B14
GCA_001629475.1ScaffoldLUSK00000000SAMN04534691
REDSEA-S33_B15
GCA_001629495.1ScaffoldLUSL00000000SAMN04534692
REDSEA-S45_B9
GCA_001626605.1ContigLUNZ00000000SAMN04534575
REDSEA-S21_B4
GCA_001626525.1ScaffoldLUOA00000000SAMN04534576
REDSEA-S27_B4
GCA_001628435.1ScaffoldLURP00000000SAMN04534670
REDSEA-S03_B6
GCA_001628455.1ScaffoldLURQ00000000SAMN04534671
REDSEA-S10_B2
GCA_001628485.1ScaffoldLURR00000000SAMN04534672
REDSEA-S11_B3N4
GCA_001628475.1ContigLURS00000000SAMN04534673
REDSEA-S19_B7N8
GCA_001629165.1ScaffoldLURT00000000SAMN04534674
REDSEA-S25_B4N5
GCA_001629155.1ScaffoldLURU00000000SAMN04534675
REDSEA-S29_B8N9
GCA_001629205.1ScaffoldLURV00000000SAMN04534676
REDSEA-S30_B12
GCA_001629185.2ContigLURW00000000SAMN04534677
REDSEA-S37_B2N9
GCA_001629295.1ScaffoldLURX00000000SAMN04534678
REDSEA-S40_B11N13
GCA_001629245.1ScaffoldLURY00000000SAMN04534679
REDSEA-S41_B6
GCA_001629255.1ScaffoldLURZ00000000SAMN04534680
REDSEA-S42_B7
GCA_001629235.1ScaffoldLUSA00000000SAMN04534681
REDSEA-S43_B8
GCA_001626835.1ScaffoldLUOK00000000SAMN04534586
REDSEA-S15_B16
GCA_001626955.1ScaffoldLUOL00000000SAMN04534587
REDSEA-S21_B2N3
GCA_001626795.1ScaffoldLUOM00000000SAMN04534588
REDSEA-S27_B10
GCA_001626765.1ScaffoldLUOO00000000SAMN04534590
REDSEA-S28_B5
GCA_001626915.1ScaffoldLUOP00000000SAMN04534591
REDSEA-S40_B3
GCA_001626895.1ScaffoldLUOQ00000000SAMN04534592
REDSEA-S29_B6
GCA_001626925.1ContigLUOR00000000SAMN04534593
REDSEA-S32_B1
GCA_001626975.1ScaffoldLUOS00000000SAMN04534594
REDSEA-S35_B9
GCA_001627135.1ContigLUOT00000000SAMN04534595
REDSEA-S38_B3
GCA_001626995.1ScaffoldLUOU00000000SAMN04534596
REDSEA-S42_B15
GCA_001627035.1ScaffoldLUOV00000000SAMN04534597
REDSEA-S44_B2
GCA_001626575.1ScaffoldLUOW00000000SAMN04534598
REDSEA-S45_B11
GCA_001626095.1ScaffoldLUOX00000000SAMN04534599
REDSEA-S08_B1
GCA_001627105.1ScaffoldLUOY00000000SAMN04534600
REDSEA-S19_B12N3
GCA_001627075.1ScaffoldLUOZ00000000SAMN04534601
REDSEA-S25_B3
GCA_001627055.1ScaffoldLUPA00000000SAMN04534602
REDSEA-S27_B13N2
GCA_001627235.1ScaffoldLUPB00000000SAMN04534603
REDSEA-S31_B2
GCA_001627165.1ScaffoldLUPC00000000SAMN04534604
REDSEA-S32_B2
GCA_001627095.1ContigLUPD00000000SAMN04534605
REDSEA-S37_B6
GCA_001627015.1ScaffoldLUPE00000000SAMN04534606
REDSEA-S43_B1
GCA_001627255.1ScaffoldLUPF00000000SAMN04534607
REDSEA-S22_B2
GCA_001627155.1ScaffoldLUPG00000000SAMN04534608
REDSEA-S25_B9
GCA_001627295.1ScaffoldLUPH00000000SAMN04534609
REDSEA-S28_B4
GCA_001627265.1ScaffoldLUPI00000000SAMN04534610
REDSEA-S30_B4
GCA_001627175.1ScaffoldLUPJ00000000SAMN04534611
REDSEA-S31_B4
GCA_001627335.1ScaffoldLUPK00000000SAMN04534612
REDSEA-S33_B3
GCA_001627345.1ScaffoldLUPL00000000SAMN04534613
REDSEA-S34_B5
GCA_001627415.1ScaffoldLUPM00000000SAMN04534614
REDSEA-S36_B10
GCA_001627495.1ScaffoldLUPN00000000SAMN04534615
REDSEA-S37_B12
GCA_001627505.1ContigLUPO00000000SAMN04534616
REDSEA-S39_B2
GCA_001627315.1ScaffoldLUPP00000000SAMN04534617
REDSEA-S40_B4
GCA_001627395.1ScaffoldLUPQ00000000SAMN04534618
REDSEA-S43_B3
GCA_001627525.1ScaffoldLUPS00000000SAMN04534620
REDSEA-S17_B1
GCA_001627445.1ScaffoldLUPT00000000SAMN04534621
REDSEA-S22_B1
GCA_001627435.1ScaffoldLUPU00000000SAMN04534622
REDSEA-S23_B1
GCA_001627475.1ScaffoldLUPV00000000SAMN04534623
REDSEA-S28_B1
GCA_001627375.1ScaffoldLUPX00000000SAMN04534625
REDSEA-S02_B3
GCA_001627595.1ScaffoldLUPY00000000SAMN04534626
REDSEA-S03_B4
GCA_001627215.1ScaffoldLUQA00000000SAMN04534628
REDSEA-S11_B6
GCA_001627635.1ScaffoldLUQB00000000SAMN04534629
REDSEA-S29_B10
GCA_001627925.1ScaffoldLUQC00000000SAMN04534630
REDSEA-S34_B6
GCA_001627705.1ScaffoldLUQD00000000SAMN04534631
REDSEA-S02_B12
GCA_001627655.1ScaffoldLUQE00000000SAMN04534632
REDSEA-S10_B10N8
GCA_001627915.1ScaffoldLUQF00000000SAMN04534633
REDSEA-S05_B4
GCA_001627685.1ScaffoldLUQG00000000SAMN04534634
REDSEA-S06_B4
GCA_001627765.1ScaffoldLUQH00000000SAMN04534635
REDSEA-S08_B7
GCA_001627795.1ScaffoldLUQI00000000SAMN04534636
REDSEA-S09_B3
GCA_001627675.1ScaffoldLUQJ00000000SAMN04534638
REDSEA-S11_B7
GCA_001627975.1ScaffoldLUQK00000000SAMN04534639
REDSEA-S14_B10
GCA_001627755.1ScaffoldLUQL00000000SAMN04534640
REDSEA-S15_B6
GCA_001627815.1ScaffoldLUQM00000000SAMN04534641
REDSEA-S21_B5
GCA_001627955.1ScaffoldLUQN00000000SAMN04534642
REDSEA-S26_B7
GCA_001627865.1ScaffoldLUQO00000000SAMN04534643
REDSEA-S27_B3
GCA_001627735.1ScaffoldLUQP00000000SAMN04534644
REDSEA-S33_B4
GCA_001627895.1ScaffoldLUQQ00000000SAMN04534645
REDSEA-S36_B13
GCA_001627835.1ScaffoldLUQR00000000SAMN04534646
REDSEA-S39_B5
GCA_001627845.1ScaffoldLUQS00000000SAMN04534647
REDSEA-S45_B3
GCA_001469005.2ScaffoldLNZD00000000SAMN04270322
lautmerah10
GCA_001627995.1ScaffoldLUQT00000000SAMN04534648
REDSEA-S08_B3
GCA_001628005.1ScaffoldLUQU00000000SAMN04534649
REDSEA-S09_B4
GCA_001628075.1ContigLUQV00000000SAMN04534650
REDSEA-S20_B12N4
GCA_001628035.1ScaffoldLUQW00000000SAMN04534651
REDSEA-S21_B7
GCA_001628185.1ScaffoldLUQZ00000000SAMN04534654
REDSEA-S45_B6
GCA_001628055.1ScaffoldLURA00000000SAMN04534655
REDSEA-S22_B5
GCA_001628235.1ScaffoldLURB00000000SAMN04534656
REDSEA-S23_B6
GCA_001628255.1ScaffoldLURC00000000SAMN04534657
REDSEA-S24_B7
GCA_001628115.1ScaffoldLURE00000000SAMN04534659
REDSEA-S29_B3
GCA_001628315.1ScaffoldLURF00000000SAMN04534660
REDSEA-S34_B10
GCA_001628175.1ScaffoldLURG00000000SAMN04534661
REDSEA-S38_B16
GCA_001628085.1ScaffoldLURH00000000SAMN04534662
REDSEA-S40_B6
GCA_001628265.1ScaffoldLURI00000000SAMN04534663
REDSEA-S42_B3
GCA_001628295.1ScaffoldLURJ00000000SAMN04534664
REDSEA-S01_B1
GCA_001628325.1ScaffoldLURK00000000SAMN04534665
REDSEA-S02_B4
GCA_001628675.1ScaffoldLULW00000000SAMN03860279
-
GCA_001628655.1ScaffoldLULU00000000SAMN03860281
-
GCA_001628635.1ScaffoldLULX00000000SAMN03860278
-
GCA_001628555.1ScaffoldLULR00000000SAMN03860284
-
GCA_001626065.1ScaffoldLULE00000000SAMN03860297
-
GCA_001626055.1ScaffoldLULF00000000SAMN03860296
-
GCA_001626035.1ScaffoldLULG00000000SAMN03860295
-
GCA_001626015.1ScaffoldLULH00000000SAMN03860294
-
GCA_001625995.1ScaffoldLULI00000000SAMN03860293
-
GCA_001625975.1ScaffoldLULK00000000SAMN03860291
-
GCA_001625955.1ScaffoldLULJ00000000SAMN03860292
-
GCA_001625935.1ScaffoldLULL00000000SAMN03860290
-
GCA_001625915.1ScaffoldLULM00000000SAMN03860289
-
GCA_001625895.1ScaffoldLULT00000000SAMN03860282
-
GCA_001625865.1ScaffoldLULN00000000SAMN03860288
-
GCA_001625855.1ScaffoldLULO00000000SAMN03860287
-
GCA_001625775.1ScaffoldLULP00000000SAMN03860286
-
GCA_001625805.1ScaffoldLULS00000000SAMN03860283
-
GCA_001625795.1ScaffoldLULQ00000000SAMN03860285
-
GCA_001625785.1ScaffoldLULV00000000SAMN03860280
-
GCA_001629135.1ScaffoldLUMW00000000SAMN03860302
-
GCA_001629115.1ScaffoldLUMU00000000SAMN03860300
-
GCA_001629095.1ScaffoldLUMT00000000SAMN03860299
-
GCA_001629075.1ScaffoldLUMV00000000SAMN03860301
-
GCA_001629035.1ScaffoldLULZ00000000SAMN03860276
-
GCA_001629045.1ScaffoldLUMS00000000SAMN03860298
-
GCA_001629005.1ScaffoldLUMF00000000SAMN03860270
-
GCA_001628995.1ScaffoldLUMG00000000SAMN03860269
-
GCA_001628945.1ScaffoldLUMI00000000SAMN03860267
-
GCA_001628955.1ScaffoldLUMC00000000SAMN03860273
-
GCA_001628925.1ScaffoldLUML00000000SAMN03860264
-
GCA_001628915.1ScaffoldLUMD00000000SAMN03860272
-
GCA_001628895.1ScaffoldLUMP00000000SAMN03860260
-
GCA_001628855.1ScaffoldLUMJ00000000SAMN03860266
-
GCA_001628845.1ScaffoldLUMQ00000000SAMN03860259
-
GCA_001628835.1ScaffoldLUMO00000000SAMN03860261
-
GCA_001629695.1ScaffoldLUMR00000000SAMN03860258
-
GCA_001629655.1ScaffoldLULY00000000SAMN03860277
-
GCA_001629665.1ScaffoldLUMB00000000SAMN03860274
-
GCA_001629625.1ScaffoldLUMA00000000SAMN03860275
-
GCA_001629615.1ScaffoldLUMH00000000SAMN03860268
-
GCA_001629595.1ScaffoldLUMN00000000SAMN03860262
-
GCA_001629575.1ScaffoldLUMK00000000SAMN03860265
-
GCA_001629555.1ScaffoldLUMM00000000SAMN03860263
-
GCA_001629525.1ScaffoldLUME00000000SAMN03860271
-
SRA Data Details
ParameterValue
Data volume, Gbases90
Data volume, Mbytes63330

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