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Accession: PRJEB5065 ID: 244030

Multi_Drug_Resistant_Gram_Negative_Rods__MDR_GNR__sequencing_study

http://www.sanger.ac.uk/resources/downloads/bacteria/ These data are part of a pre-publication release. More...
AccessionPRJEB5065
Data TypeGenome sequencing and assembly
ScopeMonoisolate
Publications
  • Moradigaravand D et al., "Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland.", mBio, 2017 Feb 21;8(1)
  • Moradigaravand D et al., "Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland.", Genome Res, 2016 Aug;26(8):1101-9
SubmissionRegistration date: 8-Apr-2014
Wellcome Sanger Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)47583
WGS master823
Genomic DNA1
SRA Experiments1298
Protein Sequences3986556
Publications
PubMed2
PMC2
Other datasets
BioSample1298
Assembly823
Assembly details:
Assembly levelNumber of Assemblies
823
823
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_900077465.1ScaffoldFKFJ00000000SAMEA2273199
e621
GCA_900077295.1ScaffoldFKES00000000SAMEA2273186
e545
GCA_900077775.1ScaffoldFKGO00000000SAMEA2273239
e800
GCA_900077725.1ScaffoldFKGK00000000SAMEA2273236
e794
GCA_900076585.1ScaffoldFKCC00000000SAMEA2273456
e2414
GCA_900076385.1ScaffoldFKBI00000000SAMEA2273432
e2022
GCA_900075335.1ScaffoldFJXI00000000SAMEA2273207
e1087
GCA_900075075.1ScaffoldFJWF00000000SAMEA2273285
e1044
GCA_900075565.1ScaffoldFJYI00000000SAMEA2273338
e1342
GCA_900075815.1ScaffoldFJZI00000000SAMEA2273372
e1527
GCA_900078165.1ScaffoldFKIB00000000SAMEA2273277
e977
GCA_900076365.1ScaffoldFKBK00000000SAMEA2273434
MDR0360, e2032
GCA_900077695.1ScaffoldFKGE00000000SAMEA2273233
MDR0129, e773
GCA_900078025.1ScaffoldFKHQ00000000SAMEA2273264
MDR0163, e912
GCA_900077215.1ScaffoldFKEG00000000SAMEA2273177
MDR0071, e483
GCA_900077125.1ScaffoldFKED00000000SAMEA2273167
e438
GCA_900077545.1ScaffoldFKFQ00000000SAMEA2273206
MDR0108, e657
GCA_900077605.1ScaffoldFKFV00000000SAMEA2273216
MDR0112, e669
GCA_900077165.1ScaffoldFKEM00000000SAMEA2273171
MDR0064, e456
GCA_900077005.1ScaffoldFKDT00000000SAMEA2273477
MDR0046, e362
GCA_900077205.1ScaffoldFKGW00000000SAMEA2298375
MDR0069, e478
GCA_900077105.1ScaffoldFKGQ00000000SAMEA2298373
MDR0056, e415
GCA_900077075.1ScaffoldFKIY00000000SAMEA2273162
e403
GCA_900075165.1ScaffoldFJWO00000000SAMEA2273313
MDR0226, e1236
GCA_900075855.1ScaffoldFJZP00000000SAMEA2273379
MDR0296, e1556
GCA_900075425.1ScaffoldFJXR00000000SAMEA2273318
MDR0231, e1252
GCA_900075545.1ScaffoldFJYH00000000SAMEA2273337
MDR0253, e1340
GCA_900075555.1ScaffoldFJYG00000000SAMEA2273336
MDR0252, e1339
GCA_900075485.1ScaffoldFJXZ00000000SAMEA2273331
MDR0246, e1323
GCA_900077185.1ScaffoldFKEI00000000SAMEA2273170
e452
GCA_900076975.1ScaffoldFKDR00000000SAMEA2273153
e341
GCA_900077025.1ScaffoldFKDV00000000SAMEA2273157
e380
GCA_900077015.1ScaffoldFKDU00000000SAMEA2273156
e377
GCA_900076995.1ScaffoldFKDS00000000SAMEA2273155
e352
GCA_900076985.1ScaffoldFKDQ00000000SAMEA2273154
e351
GCA_900076935.1ScaffoldFKDP00000000SAMEA2273152
e332
GCA_900076955.1ScaffoldFKDM00000000SAMEA2273150
e319
GCA_900076965.1ScaffoldFKDO00000000SAMEA2273151
e320
GCA_900076895.1ScaffoldFKIX00000000SAMEA2273146
e301
GCA_900076865.1ScaffoldFKCL00000000SAMEA2273145
e294
GCA_900076875.1ScaffoldFKCY00000000SAMEA2273144
e292
GCA_900076845.1ScaffoldFKDJ00000000SAMEA2273143
e289
GCA_900076855.1ScaffoldFKCE00000000SAMEA2273142
e288
GCA_900076835.1ScaffoldFKCK00000000SAMEA2273141
e287
GCA_900076815.1ScaffoldFKBX00000000SAMEA2273140
e283
GCA_900076805.1ScaffoldFKBW00000000SAMEA2273139
e282
GCA_900076705.1ScaffoldFKCJ00000000SAMEA2273137
e267
GCA_900076915.1ScaffoldFKIW00000000SAMEA2273148
e317
GCA_900076925.1ScaffoldFKDN00000000SAMEA2273149
e318
GCA_900076945.1ScaffoldFKCZ00000000SAMEA2273147
e316
GCA_900076675.1ScaffoldFKDE00000000SAMEA2273135
e261
GCA_900076635.1ScaffoldFKCV00000000SAMEA2273134
e248
GCA_900076595.1ScaffoldFKDH00000000SAMEA2273133
e242
GCA_900077895.1ScaffoldFKHD00000000SAMEA2273128
e85
GCA_900077705.1ScaffoldFKGI00000000SAMEA2273127
e78
GCA_900077595.1ScaffoldFKFW00000000SAMEA2273125
e71
GCA_900077565.1ScaffoldFKFU00000000SAMEA2273124
e67
GCA_900077525.1ScaffoldFKFS00000000SAMEA2273215
e659
GCA_900076905.1ScaffoldFKCP00000000SAMEA2273211
e302
GCA_900077515.1ScaffoldFKFN00000000SAMEA2273204
e633
GCA_900077495.1ScaffoldFKFM00000000SAMEA2273203
e629
GCA_900077475.1ScaffoldFKFL00000000SAMEA2273202
e628
GCA_900077485.1ScaffoldFKFK00000000SAMEA2273201
e627
GCA_900077445.1ScaffoldFKFH00000000SAMEA2273197
e600
GCA_900077415.1ScaffoldFKFG00000000SAMEA2273196
e597
GCA_900077405.1ScaffoldFKFC00000000SAMEA2273195
e592
GCA_900077395.1ScaffoldFKFB00000000SAMEA2273194
e590
GCA_900077375.1ScaffoldFKFA00000000SAMEA2273192
e572
GCA_900077365.1ScaffoldFKEX00000000SAMEA2273191
e571
GCA_900077355.1ScaffoldFKEZ00000000SAMEA2273190
e559
GCA_900077135.1ScaffoldFKEC00000000SAMEA2273166
e435
GCA_900077115.1ScaffoldFKEB00000000SAMEA2273165
e432
GCA_900077085.1ScaffoldFKDZ00000000SAMEA2273163
e404
GCA_900077065.1ScaffoldFKDX00000000SAMEA2273161
e400
GCA_900077055.1ScaffoldFKDW00000000SAMEA2273160
e391
GCA_900077045.1ScaffoldFKDY00000000SAMEA2273159
e395
GCA_900077225.1ScaffoldFKEH00000000SAMEA2273176
e482
GCA_900077175.1ScaffoldFKEK00000000SAMEA2273172
e458
GCA_900077335.1ScaffoldFKEW00000000SAMEA2273188
e554
GCA_900077325.1ScaffoldFKEV00000000SAMEA2273187
e552
GCA_900077315.1ScaffoldFKER00000000SAMEA2273185
e534
GCA_900077285.1ScaffoldFKEQ00000000SAMEA2273184
e533
GCA_900077275.1ScaffoldFKEN00000000SAMEA2273183
e532
GCA_900077255.1ScaffoldFKEU00000000SAMEA2273182
e521
GCA_900077265.1ScaffoldFKEP00000000SAMEA2273181
e513
GCA_900077245.1ScaffoldFKEO00000000SAMEA2273179
e487
GCA_900077235.1ScaffoldFKEL00000000SAMEA2273178
e484
GCA_900077755.1ScaffoldFKGL00000000SAMEA2273238
e798
GCA_900077715.1ScaffoldFKGM00000000SAMEA2273237
e795
GCA_900077735.1ScaffoldFKGH00000000SAMEA2273235
e783
GCA_900077685.1ScaffoldFKGG00000000SAMEA2273234
e774
GCA_900077655.1ScaffoldFKGD00000000SAMEA2273231
e765
GCA_900077665.1ScaffoldFKGA00000000SAMEA2273230
e751
GCA_900077645.1ScaffoldFKFZ00000000SAMEA2273229
e745
GCA_900077625.1ScaffoldFKGC00000000SAMEA2273228
e742
GCA_900077635.1ScaffoldFKFY00000000SAMEA2273226
e722
GCA_900077615.1ScaffoldFKGB00000000SAMEA2273225
e716
GCA_900077585.1ScaffoldFKFT00000000SAMEA2273223
e703
GCA_900077575.1ScaffoldFKFX00000000SAMEA2273222
e698
GCA_900078015.1ScaffoldFKHO00000000SAMEA2273263
e903
GCA_900078005.1ScaffoldFKHN00000000SAMEA2273262
e901
GCA_900077975.1ScaffoldFKHM00000000SAMEA2273261
e894
GCA_900077985.1ScaffoldFKHI00000000SAMEA2273260
e884
GCA_900077965.1ScaffoldFKHK00000000SAMEA2273259
e880
GCA_900077945.1ScaffoldFKHJ00000000SAMEA2273258
e878
GCA_900077935.1ScaffoldFKHH00000000SAMEA2273256
e871
GCA_900077955.1ScaffoldFKHF00000000SAMEA2273254
e856
GCA_900077905.1ScaffoldFKHE00000000SAMEA2273253
e854
GCA_900077915.1ScaffoldFKHC00000000SAMEA2273252
e843
GCA_900077885.1ScaffoldFKHB00000000SAMEA2273250
e841
GCA_900077875.1ScaffoldFKHA00000000SAMEA2273249
e840
GCA_900077865.1ScaffoldFKGZ00000000SAMEA2273248
e833
GCA_900077855.1ScaffoldFKGX00000000SAMEA2273247
e832
GCA_900077845.1ScaffoldFKGU00000000SAMEA2273246
e829
GCA_900077835.1ScaffoldFKGY00000000SAMEA2273245
e818
GCA_900077825.1ScaffoldFKGV00000000SAMEA2273244
e815
GCA_900077805.1ScaffoldFKGS00000000SAMEA2273243
e812
GCA_900077795.1ScaffoldFKGR00000000SAMEA2273242
e811
GCA_900077785.1ScaffoldFKGP00000000SAMEA2273241
e806
GCA_900077765.1ScaffoldFKGN00000000SAMEA2273240
e804
GCA_900076355.1ScaffoldFKBJ00000000SAMEA2273433
e2024
GCA_900076075.1ScaffoldFKAH00000000SAMEA2273401
e1705
GCA_900076065.1ScaffoldFKAG00000000SAMEA2273400
e1697
GCA_900076545.1ScaffoldFKDC00000000SAMEA2273451
e2346
GCA_900076535.1ScaffoldFKCT00000000SAMEA2273450
e2300
GCA_900076525.1ScaffoldFKCA00000000SAMEA2273449
e2284
GCA_900076515.1ScaffoldFKCQ00000000SAMEA2273448
e2282
GCA_900076505.1ScaffoldFKCR00000000SAMEA2273447
e2273
GCA_900076495.1ScaffoldFKDI00000000SAMEA2273446
e2260
GCA_900076345.1ScaffoldFKBH00000000SAMEA2273431
e2005
GCA_900076305.1ScaffoldFKBG00000000SAMEA2273430
e1985
GCA_900076325.1ScaffoldFKBF00000000SAMEA2273429
e1983
GCA_900076315.1ScaffoldFKBE00000000SAMEA2273428
e1963
GCA_900076335.1ScaffoldFKBC00000000SAMEA2273427
e1948
GCA_900076295.1ScaffoldFKBD00000000SAMEA2273426
e1947
GCA_900078135.1ScaffoldFKHZ00000000SAMEA2273275
e970
GCA_900078125.1ScaffoldFKIA00000000SAMEA2273273
e967
GCA_900078115.1ScaffoldFKHX00000000SAMEA2273272
e965
GCA_900078105.1ScaffoldFKHW00000000SAMEA2273271
e953
GCA_900078095.1ScaffoldFKHV00000000SAMEA2273270
e950
GCA_900078075.1ScaffoldFKHU00000000SAMEA2273269
e929
GCA_900078055.1ScaffoldFKHT00000000SAMEA2273268
e926
GCA_900075995.1ScaffoldFJZZ00000000SAMEA2273394
e1639
GCA_900075925.1ScaffoldFJZS00000000SAMEA2273387
e1603
GCA_900075895.1ScaffoldFJZO00000000SAMEA2273384
e1586
GCA_900078155.1ScaffoldFKID00000000SAMEA2273279
e985
GCA_900078145.1ScaffoldFKIC00000000SAMEA2273278
e978
GCA_900078065.1ScaffoldFKHR00000000SAMEA2273266
e915
GCA_900078035.1ScaffoldFKHP00000000SAMEA2273265
e914
GCA_900076565.1ScaffoldFKCI00000000SAMEA2273454
e2355
GCA_900076555.1ScaffoldFKIS00000000SAMEA2273453
e2352
GCA_900076445.1ScaffoldFKCX00000000SAMEA2273442
e2140
GCA_900076435.1ScaffoldFKIQ00000000SAMEA2273441
e2129
GCA_900076455.1ScaffoldFKBQ00000000SAMEA2273440
e2127
GCA_900076425.1ScaffoldFKBO00000000SAMEA2273439
e2090
GCA_900076405.1ScaffoldFKBP00000000SAMEA2273438
e2071
GCA_900076415.1ScaffoldFKBN00000000SAMEA2273437
e2054
GCA_900076395.1ScaffoldFKBM00000000SAMEA2273436
e2049
GCA_900076375.1ScaffoldFKBL00000000SAMEA2273435
e2048
GCA_900076275.1ScaffoldFKIU00000000SAMEA2273423
e1889
GCA_900076265.1ScaffoldFKBA00000000SAMEA2273422
e1879
GCA_900076245.1ScaffoldFKAY00000000SAMEA2273420
e1837
GCA_900076205.1ScaffoldFKAU00000000SAMEA2273416
e1795
GCA_900076195.1ScaffoldFKAT00000000SAMEA2273415
e1784
GCA_900076175.1ScaffoldFKAS00000000SAMEA2273414
e1775
GCA_900076185.1ScaffoldFKAR00000000SAMEA2273413
e1774
GCA_900076145.1ScaffoldFKAO00000000SAMEA2273412
e1770
GCA_900076155.1ScaffoldFKAN00000000SAMEA2273411
e1764
GCA_900076165.1ScaffoldFKAP00000000SAMEA2273409
e1728
GCA_900076125.1ScaffoldFKAM00000000SAMEA2273407
e1720
GCA_900076115.1ScaffoldFKAL00000000SAMEA2273406
e1719
GCA_900076105.1ScaffoldFKAK00000000SAMEA2273405
e1718
GCA_900076095.1ScaffoldFKAJ00000000SAMEA2273403
e1714
GCA_900076085.1ScaffoldFKAI00000000SAMEA2273402
e1713
GCA_900076885.1ScaffoldFKCH00000000SAMEA2273475
e298
GCA_900076745.1ScaffoldFKDB00000000SAMEA2273474
e272
GCA_900076605.1ScaffoldFKDG00000000SAMEA2273473
e247
GCA_900077195.1ScaffoldFKEJ00000000SAMEA2273471
e473
GCA_900076795.1ScaffoldFKDA00000000SAMEA2273470
e2770
GCA_900076785.1ScaffoldFKCN00000000SAMEA2273469
e2761
GCA_900076775.1ScaffoldFKBU00000000SAMEA2273468
e2760
GCA_900076755.1ScaffoldFKCF00000000SAMEA2273467
e2752
GCA_900076765.1ScaffoldFKBV00000000SAMEA2273466
e2743
GCA_900076735.1ScaffoldFKCM00000000SAMEA2273465
e2722
GCA_900076725.1ScaffoldFKBY00000000SAMEA2273464
e2698
GCA_900076695.1ScaffoldFKCW00000000SAMEA2273463
e2575
GCA_900076685.1ScaffoldFKDL00000000SAMEA2273462
e2550
GCA_900076665.1ScaffoldFKCS00000000SAMEA2273461
e2549
GCA_900076645.1ScaffoldFKCO00000000SAMEA2273459
e2487
GCA_900076615.1ScaffoldFKBZ00000000SAMEA2273458
e2433
GCA_900076655.1ScaffoldFKCU00000000SAMEA2273457
e2430
GCA_900076135.1ScaffoldFKAQ00000000SAMEA2273514
e1772
GCA_900075965.1ScaffoldFJZV00000000SAMEA2273511
e1623
GCA_900076465.1ScaffoldFKCD00000000SAMEA2273510
e2144
GCA_900076475.1ScaffoldFKDF00000000SAMEA2273509
e2276
GCA_900076625.1ScaffoldFKCB00000000SAMEA2273508
e2473
GCA_900076215.1ScaffoldFKAV00000000SAMEA2273506
e1821
GCA_900076825.1ScaffoldFKIR00000000SAMEA2273505
e2793
GCA_900077095.1ScaffoldFKEA00000000SAMEA2273496
e405
GCA_900077145.1ScaffoldFKEF00000000SAMEA2273495
e440
GCA_900077385.1ScaffoldFKFD00000000SAMEA2273494
e575
GCA_900077425.1ScaffoldFKFE00000000SAMEA2273492
e595
GCA_900077435.1ScaffoldFKFF00000000SAMEA2273491
e598
GCA_900077455.1ScaffoldFKFI00000000SAMEA2273489
e615
GCA_900077505.1ScaffoldFKFO00000000SAMEA2273488
e638
GCA_900078085.1ScaffoldFKHY00000000SAMEA2273484
e939
GCA_900077995.1ScaffoldFKHL00000000SAMEA2273483
e888
GCA_900077815.1ScaffoldFKGT00000000SAMEA2273482
e813
GCA_900077745.1ScaffoldFKGJ00000000SAMEA2273481
e786
GCA_900077555.1ScaffoldFKFR00000000SAMEA2273480
e660
GCA_900083845.1ScaffoldFKZC00000000SAMEA2273864
2880STDY5682790
GCA_900075525.1ScaffoldFJYE00000000SAMEA2273334
e1336
GCA_900075085.1ScaffoldFJXO00000000SAMEA2273117
e11
GCA_900075305.1ScaffoldFJWR00000000SAMEA2273213
e1105
GCA_900075655.1ScaffoldFJYP00000000SAMEA2273346
e1387
GCA_900075775.1ScaffoldFJZD00000000SAMEA2273363
e1487
GCA_900075055.1ScaffoldFJWU00000000SAMEA2273210
e1092
GCA_900075605.1ScaffoldFJYM00000000SAMEA2273342
e1351
GCA_900076235.1ScaffoldFKAX00000000SAMEA2273419
e1832
GCA_900075615.1ScaffoldFJYN00000000SAMEA2273343
e1356
GCA_900075115.1ScaffoldFJXQ00000000SAMEA2273479
e1082
GCA_900076225.1ScaffoldFKAW00000000SAMEA2273418
e1831
GCA_900075445.1ScaffoldFJXW00000000SAMEA2273324
e1286
GCA_900075455.1ScaffoldFJXX00000000SAMEA2273326
e1294
GCA_900075915.1ScaffoldFJZR00000000SAMEA2273386
e1589
GCA_900075395.1ScaffoldFJWC00000000SAMEA2273497
e1202
GCA_900075125.1ScaffoldFJWE00000000SAMEA2273295
e1150
GCA_900075865.1ScaffoldFJZL00000000SAMEA2273378
e1554
GCA_900075505.1ScaffoldFJYC00000000SAMEA2273498
e1331
GCA_900076255.1ScaffoldFKAZ00000000SAMEA2273421
e1873
GCA_900074995.1ScaffoldFJWG00000000SAMEA2273321
e1269
GCA_900075635.1ScaffoldFJYQ00000000SAMEA2273345
e1386
GCA_900075575.1ScaffoldFJYJ00000000SAMEA2273339
e1343
GCA_900075035.1ScaffoldFJXD00000000SAMEA2273309
e1219
GCA_900075045.1ScaffoldFJXB00000000SAMEA2273208
e1089
GCA_900075285.1ScaffoldFJXU00000000SAMEA2273369
e1267
GCA_900075685.1ScaffoldFJYU00000000SAMEA2273350
e1421
GCA_900075885.1ScaffoldFJZN00000000SAMEA2273381
e1563
GCA_900075275.1ScaffoldFJWJ00000000SAMEA2273301
e1127
GCA_900075475.1ScaffoldFJYA00000000SAMEA2273330
e1319
GCA_900075385.1ScaffoldFJWQ00000000SAMEA2273298
e1155
GCA_900075175.1ScaffoldFJWS00000000SAMEA2273296
e1153
GCA_900075715.1ScaffoldFJYW00000000SAMEA2273352
e1424
GCA_900075875.1ScaffoldFJZM00000000SAMEA2273380
e1562
GCA_900075755.1ScaffoldFJZA00000000SAMEA2273130
e147
GCA_900075205.1ScaffoldFJWK00000000SAMEA2273310
e1222
GCA_900076005.1ScaffoldFKAA00000000SAMEA2273513
e1655
GCA_900075315.1ScaffoldFJXK00000000SAMEA2273281
e1025
GCA_900075015.1ScaffoldFJWZ00000000SAMEA2273291
e1125
GCA_900075695.1ScaffoldFJYV00000000SAMEA2273351
e1422
GCA_900075805.1ScaffoldFJZE00000000SAMEA2273364
e1488
GCA_900075785.1ScaffoldFJZF00000000SAMEA2273366
e1517
GCA_900075005.1ScaffoldFJXC00000000SAMEA2273300
e1109
GCA_900075835.1ScaffoldFJZJ00000000SAMEA2273373
e1531
GCA_900075945.1ScaffoldFJZT00000000SAMEA2273388
e1605
GCA_900075365.1ScaffoldFJWW00000000SAMEA2273487
e1083
GCA_900075245.1ScaffoldFJWL00000000SAMEA2273282
e1032
GCA_900075465.1ScaffoldFJXY00000000SAMEA2273329
e1316
GCA_900075095.1ScaffoldFJWP00000000SAMEA2273314
e1238
GCA_900075845.1ScaffoldFJZK00000000SAMEA2273376
e1547
GCA_900075905.1ScaffoldFJZQ00000000SAMEA2273385
e1587
GCA_900074985.1ScaffoldFJXN00000000SAMEA2273317
e1251
GCA_900074975.1ScaffoldFJXT00000000SAMEA2273292
e1130
GCA_900075825.1ScaffoldFJZH00000000SAMEA2273371
e1521
GCA_900075585.1ScaffoldFJYK00000000SAMEA2273340
e1345
GCA_900075405.1ScaffoldFJXH00000000SAMEA2273311
e1234
GCA_900075265.1ScaffoldFJXE00000000SAMEA2273212
e1101
GCA_900075985.1ScaffoldFJZY00000000SAMEA2273393
e1635
GCA_900076045.1ScaffoldFKAE00000000SAMEA2273399
e1693
GCA_900075185.1ScaffoldFJXM00000000SAMEA2273486
e1028
GCA_900075645.1ScaffoldFJYS00000000SAMEA2273348
e1408
GCA_900075345.1ScaffoldFJXP00000000SAMEA2273299
e1163
GCA_900075795.1ScaffoldFJZG00000000SAMEA2273367
e1518
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2880STDY5682894
GCA_001537265.1ScaffoldFCJL00000000SAMEA2273968
2880STDY5682895
SRA Data Details
ParameterValue
Data volume, Gbases511
Data volume, Tbytes0.35

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