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Accession: PRJNA311266 ID: 311266

Arabidopsis thaliana (thale cress)

Arabidopsis thaliana Genome sequencing and assembly

See Genome Information for Arabidopsis thaliana
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7331 additional projects are related by organism.
This study aims at characterizing the variation between the current strain genome of Arabidospsis thaliana and the second widely used strain Ler. More...
AccessionPRJNA311266
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsZapata L et al., "Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms.", Proc Natl Acad Sci U S A, 2016 Jul 12;113(28):E4052-60
SubmissionRegistration date: 25-May-2016
Center for genomic Regulation
NCBI Links
RelevanceModel Organism
Locus Tag PrefixAXX17
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)36
WGS master1
SRA Experiments4
Protein Sequences30837
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_001651475.1ChromosomeLUHQ00000000
5
SAMN04457953
Arabidopsis thaliana
SRA Data Details
ParameterValue
Data volume, Gbases77
Data volume, Mbytes47149

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  • GOLD: Gp0235893 [Genomes On Line Database]
    GOLD: Gp0235893
    Genomes On Line Database

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