Estimation of variablility in the gut microbiota r... (ID 356851) - BioProject

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Accession: PRJEB18536 ID: 356851

Estimation of variablility in the gut microbiota resitome of the Russian citizens aimed at identification of pathways for transmission and spread of antibiotic resistance.

The resistance can accumulate in the microbiome after antibiotic treatment against infectious agents, and it can be passed to pathogenic bacteria during further infections, even though absence of the target infection is checked after each therapy.

Results of the project will widen the comprehension of the mechanisms of AR transfer from microbiota to infectious agents, and based on the modelling system will allow to make the system cotrolling the ARspread more accurate, Additionally it will allow to elobarate new schemes of antibiotic therapy (including variety of drugs), which will take into acoount current resistance.

Accession	PRJEB18536; ENA-SUBMISSION: ERA774824
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 9-Dec-2016 Moscow

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	20013
WGS master	21
Other datasets
BioSample	21
Assembly	21

Assembly details:

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Number of Assemblies

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Contig

Total

19
2
21

Assembly	WGS	BioSample	Taxonomy
GCA_900148545.1	FRXR00000000	SAMEA23872168	Enterococcus faecalis
GCA_900148535.1	FRYC00000000	SAMEA23870668	Enterococcus faecalis
GCA_900148695.1	FRXS00000000	SAMEA23874418	Enterococcus faecalis
GCA_900148605.1	FRYA00000000	SAMEA23873668	Enterococcus faecium
GCA_900148655.1	FRYG00000000	SAMEA23872918	Enterococcus faecium
GCA_900148565.1	FRXU00000000	SAMEA23869918	Enterococcus faecium
GCA_900148525.1	FRXX00000000	SAMEA23868418	Enterococcus faecium
GCA_900148685.1	FRYD00000000	SAMEA23866918	Enterococcus faecium
GCA_900148705.1	FRXP00000000	SAMEA23866168	Enterococcus faecium
GCA_900148575.1	FRYI00000000	SAMEA23865418	Enterococcus faecium
GCA_900148665.1	FRXT00000000	SAMEA23864668	Enterococcus faecium
GCA_900148675.1	FRYB00000000	SAMEA23863918	Enterococcus faecium
GCA_900148725.1	FRXV00000000	SAMEA23863168	Enterococcus faecium
GCA_900148635.1	FRXZ00000000	SAMEA23862418	Enterococcus faecium
GCA_900148715.1	FRXY00000000	SAMEA23861668	Enterococcus faecium
GCA_900148615.1	FRYE00000000	SAMEA23860918	Enterococcus faecium
GCA_900148595.1	FRXQ00000000	SAMEA23860168	Enterococcus faecium
GCA_900148585.1	FRYF00000000	SAMEA23859418	Enterococcus faecium
GCA_900148555.1	FRXW00000000	SAMEA23871418	Enterococcus faecium
GCA_900148625.1	FRYJ00000000	SAMEA23869168	Enterococcus faecium
GCA_900148645.1	FRYH00000000	SAMEA23867668	Escherichia coli

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Estimation of variablility in the gut microbiota resitome of the Russian citizens aimed at identification of pathways for transmission and spread of antibiotic resistance.

The resistance can accumulate in the microbiome after antibiotic treatment against infectious agents, and it can be passed to pathogenic bacteria during further infections, even though absence of the target infection is checked after each therapy.

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