Pasteurellaceae (ID 343597) - BioProject

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Accession: PRJNA343597 ID: 343597

Pasteurellaceae

Pasteurellaceae Genome sequencing and assembly

To reclassify Pasteurella pneumotropica as a new genus, Rodentibacter gen.nov with species. It improves the characterization of isolates associated with rodents

Accession	PRJNA343597
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Pasteurellaceae[Taxonomy ID: 712] Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae
Publications	Adhikary S et al., "Rodentibacter gen. nov. including Rodentibacter pneumotropicus comb. nov., Rodentibacter heylii sp. nov., Rodentibacter myodis sp. nov., Rodentibacter ratti sp. nov., Rodentibacter heidelbergensis sp. nov., Rodentibacter trehalosifermentans sp. nov., Rodentibacter rarus sp. nov., Rodentibacter mrazii and two genomospecies.", Int J Syst Evol Microbiol, 2017 Jun;67(6):1793-1806
Submission	Registration date: 15-Feb-2017 University of Copenhagen

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2504
WGS master	25
Protein Sequences	54219
Publications
PubMed	1
Other datasets
BioSample	25
Assembly	25

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

25
25

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001998905.1	MLAA00000000	SAMN05858751	1998236014	Rodentibacter caecimuris
GCA_001998625.1	MLAB00000000	SAMN05858756	199137021	Rodentibacter caecimuris
GCA_001998595.1	MLAC00000000	SAMN05858759	1999250011	Rodentibacter caecimuris
GCA_001998675.1	MLAE00000000	SAMN05860605	Ppn152	Rodentibacter caecimuris
GCA_001998665.1	MLAD00000000	SAMN05860602	2002178011	Rodentibacter caecimuris
GCA_001998725.1	MLAF00000000	SAMN05860609	Ppn222	Rodentibacter caecimuris
GCA_001999285.1	MLHN00000000	SAMN05892282	Ppn416	Rodentibacter genomosp. 1
GCA_001999425.1	MLHP00000000	SAMN05892295	Ppn422	Rodentibacter genomosp. 2
GCA_002000435.1	MLHO00000000	SAMN05892294	1996246016	Rodentibacter genomosp. 2
GCA_002000125.1	MLHH00000000	SAMN05892232	Ac69	Rodentibacter heidelbergensis
GCA_001998825.1	MLHG00000000	SAMN05892226	Ppn418	Rodentibacter mrazii
GCA_001999305.1	MLHQ00000000	SAMN05898504	Ac151	Rodentibacter myodis
GCA_001998565.1	MKZZ00000000	SAMN05858750	P441	Rodentibacter pneumotropicus
GCA_001998505.1	MJMB00000000	SAMN05791174	Ln316_4	Rodentibacter pneumotropicus
GCA_002000505.1	MLHR00000000	SAMN05898514	Ac63	Rodentibacter pneumotropicus
GCA_002000405.1	MLHI00000000	SAMN05892249	2005150027	Rodentibacter rarus
GCA_001998965.1	MLHJ00000000	SAMN05892255	CCUG 17206	Rodentibacter rarus
GCA_002000525.1	MLAH00000000	SAMN05860626	Ppn157	Rodentibacter ratti
GCA_002000485.1	MLAJ00000000	SAMN05860832	F75	Rodentibacter ratti
GCA_002000465.1	MLAI00000000	SAMN05860630	Ppn158	Rodentibacter ratti
GCA_002000145.1	MLAG00000000	SAMN05860624	Ac81	Rodentibacter ratti
GCA_001999335.1	MLHS00000000	SAMN05901964	Ppn85	Rodentibacter sp. Ppn85
GCA_001999265.1	MLHM00000000	SAMN05892269	H1998003092	Rodentibacter trehalosifermentans
GCA_002000545.1	MLHL00000000	SAMN05892265	H1987082031	Rodentibacter trehalosifermentans
GCA_002000425.1	MLHK00000000	SAMN05892258	H1983213011	Rodentibacter trehalosifermentans

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Pasteurellaceae

Pasteurellaceae Genome sequencing and assembly

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