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Accession: PRJNA310790 ID: 310790

sludge metagenome

Draft genomes of syntroph and methanogen populations from methanogenic wastewater-treating bioreactor granular sludge metagenome

Draft genomes of syntroph and methanogen populations extracted from metagenome of granular sludge of methanogenic bioreactors treating purified terephthalic acid process wastewater
AccessionPRJNA310790
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsludge metagenome[Taxonomy ID: 1592332]
unclassified sequences; metagenomes; ecological metagenomes; sludge metagenome
PublicationsNobu MK et al., "Thermodynamically diverse syntrophic aromatic compound catabolism.", Environ Microbiol, 2017 Nov;19(11):4576-4586
SubmissionRegistration date: 22-Mar-2017
University of Illinois
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)11721
WGS master52
Protein Sequences136402
Publications
PubMed1
Other datasets
BioSample54
Assembly52
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
52
52
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_002067065.1ContigMVPY00000000SAMN04534929
PtaB.Bin024
Methanobacterium sp. PtaB.Bin024
GCA_002067325.1ContigMVQY00000000SAMN04534930
PtaU1.Bin097
Methanobacterium sp. PtaU1.Bin097
GCA_002067565.1ContigMVQZ00000000SAMN04534931
PtaU1.Bin242
Methanobacterium sp. PtaU1.Bin242
GCA_002067315.1ContigMVRA00000000SAMN04534932
PtaU1.Bin125
Methanocella sp. PtaU1.Bin125
GCA_002067045.1ContigMVPZ00000000SAMN04534933
PtaB.Bin134
Methanomassiliicoccales archaeon PtaB.Bin134
GCA_002067005.1ContigMVQA00000000SAMN04534934
PtaB.Bin215
Methanomassiliicoccales archaeon PtaB.Bin215
GCA_002067635.1ContigMVRB00000000SAMN04534935
PtaU1.Bin030
Methanomassiliicoccales archaeon PtaU1.Bin030
GCA_002067865.1ContigMVRC00000000SAMN04534936
PtaU1.Bin124
Methanomassiliicoccales archaeon PtaU1.Bin124
GCA_002067265.1ContigMVQW00000000SAMN04534927
PtaU1.Bin073
Methanomethylovorans sp. PtaU1.Bin073
GCA_002067275.1ContigMVQX00000000SAMN04534928
PtaU1.Bin093
Methanomethylovorans sp. PtaU1.Bin093
GCA_002067035.1ContigMVQB00000000SAMN04534937
PtaB.Bin085
Methanoregula sp. PtaB.Bin085
GCA_002067645.1ContigMVRD00000000SAMN04534938
PtaU1.Bin006
Methanoregula sp. PtaU1.Bin006
GCA_002067895.1ContigMVRE00000000SAMN04534939
PtaU1.Bin051
Methanoregula sp. PtaU1.Bin051
GCA_002067115.1ContigMVQC00000000SAMN04534940
PtaB.Bin009
Methanoregulaceae archaeon PtaB.Bin009
GCA_002067095.1ContigMVQD00000000SAMN04534941
PtaB.Bin056
Methanoregulaceae archaeon PtaB.Bin056
GCA_002067485.1ContigMVQE00000000SAMN04534942
PtaB.Bin108
Methanoregulaceae archaeon PtaB.Bin108
GCA_002067155.1ContigMVQF00000000SAMN04534943
PtaB.Bin152
Methanoregulaceae archaeon PtaB.Bin152
GCA_002067335.1ContigMVRF00000000SAMN04534944
PtaU1.Bin059
Methanoregulaceae archaeon PtaU1.Bin059
GCA_002067665.1ContigMVRG00000000SAMN04534945
PtaU1.Bin066
Methanoregulaceae archaeon PtaU1.Bin066
GCA_002067685.1ContigMVRH00000000SAMN04534946
PtaU1.Bin222
Methanoregulaceae archaeon PtaU1.Bin222
GCA_002067725.1ContigMVQG00000000SAMN04534947
PtaB.Bin005
Methanosaeta sp. PtaB.Bin005
GCA_002067755.1ContigMVQH00000000SAMN04534948
PtaB.Bin018
Methanosaeta sp. PtaB.Bin018
GCA_002067795.1ContigMVQI00000000SAMN04534949
PtaB.Bin039
Methanosaeta sp. PtaB.Bin039
GCA_002067495.1ContigMVQJ00000000SAMN04534954
PtaB.Bin087
Methanosaeta sp. PtaB.Bin087
GCA_002067905.1ContigMVRI00000000SAMN04534950
PtaU1.Bin016
Methanosaeta sp. PtaU1.Bin016
GCA_002067935.1ContigMVRJ00000000SAMN04534951
PtaU1.Bin028
Methanosaeta sp. PtaU1.Bin028
GCA_002067955.1ContigMVRM00000000SAMN04534955
PtaU1.Bin055
Methanosaeta sp. PtaU1.Bin055
GCA_002067365.1ContigMVRK00000000SAMN04534952
PtaU1.Bin060
Methanosaeta sp. PtaU1.Bin060
GCA_002067705.1ContigMVRL00000000SAMN04534953
PtaU1.Bin112
Methanosaeta sp. PtaU1.Bin112
GCA_002067515.1ContigMVQK00000000SAMN04534956
PtaB.Bin013
Pelotomaculum sp. PtaB.Bin013
GCA_002067205.1ContigMVQL00000000SAMN04534957
PtaB.Bin104
Pelotomaculum sp. PtaB.Bin104
GCA_002067195.1ContigMVQM00000000SAMN04534958
PtaB.Bin117
Pelotomaculum sp. PtaB.Bin117
GCA_002067965.1ContigMVRN00000000SAMN04534959
PtaU1.Bin035
Pelotomaculum sp. PtaU1.Bin035
GCA_002067395.1ContigMVRO00000000SAMN04534960
PtaU1.Bin065
Pelotomaculum sp. PtaU1.Bin065
GCA_002068015.1ContigMVRV00000000SAMN04534975
PtaU1.Bin162
Smithella sp. PtaU1.Bin162
GCA_002067855.1ContigMVQS00000000SAMN04534971
PtaB.Bin038
Syntrophaceae bacterium PtaB.Bin038
GCA_002067595.1ContigMVQT00000000SAMN04534972
PtaB.Bin095
Syntrophaceae bacterium PtaB.Bin095
GCA_002068035.1ContigMVRX00000000SAMN04534977
PtaU1.Bin231
Syntrophaceae bacterium PtaU1.Bin231
GCA_002067405.1ContigMVRP00000000SAMN04534961
PtaU1.Bin034
Syntrophorhabdaceae bacterium PtaU1.Bin034
GCA_002067165.1ContigMVQN00000000SAMN04534962
PtaB.Bin006
Syntrophorhabdus sp. PtaB.Bin006
GCA_002067585.1ContigMVQO00000000SAMN04534963
PtaB.Bin027
Syntrophorhabdus sp. PtaB.Bin027
GCA_002067235.1ContigMVQP00000000SAMN04534964
PtaB.Bin047
Syntrophorhabdus sp. PtaB.Bin047
GCA_002067555.1ContigMVQQ00000000SAMN04534965
PtaB.Bin184
Syntrophorhabdus sp. PtaB.Bin184
GCA_002067415.1ContigMVRQ00000000SAMN04534966
PtaU1.Bin002
Syntrophorhabdus sp. PtaU1.Bin002
GCA_002067445.1ContigMVRR00000000SAMN04534967
PtaU1.Bin050
Syntrophorhabdus sp. PtaU1.Bin050
GCA_002067975.1ContigMVRS00000000SAMN04534968
PtaU1.Bin058
Syntrophorhabdus sp. PtaU1.Bin058
GCA_002067475.1ContigMVRT00000000SAMN04534969
PtaU1.Bin153
Syntrophorhabdus sp. PtaU1.Bin153
GCA_002067815.1ContigMVQR00000000SAMN04534970
PtaB.Bin001
Syntrophus sp. PtaB.Bin001
GCA_002067825.1ContigMVQV00000000SAMN04591939
PtaB.Bin075
Syntrophus sp. PtaB.Bin075
GCA_002067245.1ContigMVQU00000000SAMN04534973
PtaB.Bin138
Syntrophus sp. PtaB.Bin138
GCA_002067745.1ContigMVRU00000000SAMN04534974
PtaU1.Bin005
Syntrophus sp. PtaU1.Bin005
GCA_002068025.1ContigMVRW00000000SAMN04534976
PtaU1.Bin208
Syntrophus sp. PtaU1.Bin208

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