See
Genome Information for Physcomitrium patens
University of Freiburg, Germany in collaboration with U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and several other laboratories from US, UK, Germany and Japan have sequenced and annotated the genome of P. patens.
| Accession | PRJNA13064 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Physcomitrium patens[Taxonomy ID: 3218] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium; Physcomitrium patens |
| Publications (total 8) Less... | - Lang D et al., "The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution.", Plant J, 2018 Feb;93(3):515-533
More...- Lang D et al., "The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution.", Plant J, 2018 Feb;93(3):515-533
- Rensing SA et al., "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.", Science, 2008 Jan 4;319(5859):64-9
- Terasawa K et al., "The mitochondrial genome of the moss Physcomitrella patens sheds new light on mitochondrial evolution in land plants.", Mol Biol Evol, 2007 Mar;24(3):699-709
- Nakamura T et al., "Transcript profiling in plastid arginine tRNA-CCG gene knockout moss: construction of Physcomitrella patens plastid DNA microarray.", Plant Biol (Stuttg), 2005 May;7(3):258-65
- Sugiura C et al., "Plastid transformation reveals that moss tRNA(Arg)-CCG is not essential for plastid function.", Plant J, 2004 Oct;40(2):314-21
- Miyata Y et al., "Tissue- and stage-specific RNA editing of rps 14 transcripts in moss (Physcomitrella patens) chloroplasts.", J Plant Physiol, 2004 Jan;161(1):113-5
- Sugiura C et al., "Complete chloroplast DNA sequence of the moss Physcomitrella patens: evidence for the loss and relocation of rpoA from the chloroplast to the nucleus.", Nucleic Acids Res, 2003 Sep 15;31(18):5324-31
- Miyata Y et al., "Chloroplast ribosomal S14 protein transcript is edited to create a translation initiation codon in the moss Physcomitrella patens.", Biochim Biophys Acta, 2002 Jul 19;1576(3):346-9
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| Submission | Registration date: 27-Nov-2007
Moss Genome Consortium |
| Related Resources | |
| Locus Tag Prefix | PHYPA |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 156 |
| WGS master | 1 |
| Protein Sequences | 31248 |
| Publications |
| PubMed | 8 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |