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Links from Nucleotide

Accession: PRJNA430813 ID: 430813

NIH Clinical Center Carbapenem Resistant Bacteria: An Analysis of Hospital Plumbing

Carbapenem Resistant Enterobacteriaceae strains including Klebsiella, Escherichia, Enterobacter, Citrobacter and Pantoea species isolated from patients and hospital environment.
AccessionPRJNA430813
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsWeingarten RA et al., "Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of Bacterial Plasmids Conferring Carbapenem Resistance.", mBio, 2018 Feb 6;9(1)
SubmissionRegistration date: 19-Jan-2018
NIH
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)5436
WGS master52
Genomic DNA151
SRA Experiments114
Protein Sequences424000
Publications
PubMed1
PMC1
Other datasets
BioSample83
Assembly83
Supplementary data
Base modification93
Genome assemblies, organelles and plasmids:
Assembly GCA_002918615.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKK00000000
Assembly GCA_002918635.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKN00000000
Assembly GCA_002918655.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKL00000000
Assembly GCA_002918665.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKO00000000
Assembly GCA_002918695.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKP00000000
Assembly GCA_002918705.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKR00000000
Assembly GCA_002918735.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKY00000000
Assembly GCA_002918755.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKZ00000000
Assembly GCA_002918765.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKT00000000
Assembly GCA_002918795.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLD00000000
Assembly GCA_002918815.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLE00000000
Assembly GCA_002918835.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLG00000000
Assembly GCA_002918855.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLF00000000
Assembly GCA_002918865.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLI00000000
Assembly GCA_002918875.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLJ00000000
Assembly GCA_002918915.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLL00000000
Assembly GCA_002918955.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJU00000000
Assembly GCA_002918965.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLP00000000
Assembly GCA_002918995.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJX00000000
Assembly GCA_002919015.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJZ00000000
Assembly GCA_002919035.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKD00000000
Assembly GCA_002919525.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKA00000000
Assembly GCA_002919545.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKB00000000
Assembly GCA_002919565.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKJ00000000
Assembly GCA_002919575.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKI00000000
Assembly GCA_002919605.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKM00000000
Assembly GCA_002919625.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKQ00000000
Assembly GCA_002919645.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKS00000000
Assembly GCA_002919665.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKU00000000
Assembly GCA_002919685.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKV00000000
Assembly GCA_002919705.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKW00000000
Assembly GCA_002919725.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKX00000000
Assembly GCA_002919745.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLB00000000
Assembly GCA_002919765.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLA00000000
Assembly GCA_002919775.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLC00000000
Assembly GCA_002919795.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLH00000000
Assembly GCA_002919825.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLK00000000
Assembly GCA_002919845.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLM00000000
Assembly GCA_002919855.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLN00000000
Assembly GCA_002919885.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLO00000000
Assembly GCA_002919905.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQLQ00000000
Assembly GCA_002920095.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJS00000000
Assembly GCA_002920115.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJT00000000
Assembly GCA_002920135.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJQ00000000
Assembly GCA_002920145.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJR00000000
Assembly GCA_002920175.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJV00000000
Assembly GCA_002920195.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJY00000000
Assembly GCA_002920235.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKC00000000
Assembly GCA_002920265.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKE00000000
Assembly GCA_002920285.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKH00000000
Assembly GCA_002920305.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQKF00000000
Assembly GCA_002922505.1 :
NameGenBank
Whole Genome Shotgun AssemblyPQJW00000000
SRA Data Details
ParameterValue
Data volume, Gbases241
Data volume, Tbytes0.40

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