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Accession: PRJNA477386 ID: 477386

Urocitellus parryii isolate:AGS 11-09-20 (Arctic ground squirrel)

Urocitellus parryii isolate:AGS 11-09-20 Genome sequencing and assembly

See Genome Information for Urocitellus parryii
The Arctic ground squirrel (Urocitellus parryii, formerly Spermophilus parryii) is a diurnal, hibernating ground squirrel that is native to the Arctic. Adult females hibernate over winter from early August to late April, and adult males from late September to early April, at which time they can reduce their metabolism by 98% and the core body temperature from 37 °C to -2.9 °C. Torpor bouts during hibernation, like in other small hibernators, is periodically interrupted by spontaneous arousal episodes when animals raise their metabolism and body temperature returns to euthermic levels (>30 °C) for <24 hours.
AccessionPRJNA477386
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismUrocitellus parryii[Taxonomy ID: 9999]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus; Urocitellus parryii
Grants
  • "Bioinformatics Support" (Grant ID P20GM103395, Alaska IDeA Network of Biomedical Research Excellence)
SubmissionRegistration date: 24-Aug-2018
UAF
RelevanceModel Organism
Locus Tag PrefixDPW29
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1
SRA Experiments5
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases381
Data volume, Tbytes0.16
Related RefSeq Project
PRJNA489874 : Urocitellus parryii isolate:AGS 11-09-20 RefSeq Genome sequencing and assembly

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