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Accession: PRJEB28660 ID: 503168

Single molecule sequencing shows an extensive structural diversity of Carbapenemase-producing enterobacteria.

Carbapenemase-producing bacteria are resistant against almost all beta-lactam and cephalosporin class antibiotics and represent a growing health crisis. More...
AccessionPRJEB28660
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 31-Oct-2018
BIOZENTRUM, UNIVERSITY OF BASEL
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)683
WGS master100
Genomic DNA10
SRA Experiments220
Protein Sequences581428
Other datasets
BioSample110
Assembly110
Assembly details:
Assembly levelNumber of Assemblies
10
100
110
AssemblyLevelWGSChrsBioSampleIsolateTaxonomy
GCA_900608375.1ContigUWYH00000000
SAMEA4916122
abaum009
GCA_900608255.1ContigUWXX00000000
SAMEA4916109
abaum008
GCA_900608095.1ContigUWXI00000000
SAMEA4916094
abaum007
GCA_900607885.1ContigUWWO00000000
SAMEA4916073
abaum006
GCA_900607825.1ContigUWWI00000000
SAMEA4916067
abaum005
GCA_900607765.1ContigUWWE00000000
SAMEA4916062
abaum004
GCA_900607755.1ContigUWWD00000000
SAMEA4916060
abaum003
GCA_900607735.1ContigUWWC00000000
SAMEA4916058
abaum002
GCA_900607695.1ContigUWVY00000000
SAMEA4916054
abaum001
GCA_900607625.1ContigUWVS00000000
SAMEA4916047
abaum000
GCA_900618295.1Complete genomeSAMEA4916090
ecoli019
GCA_900608365.1ContigUWYG00000000
SAMEA4916121
ecoli027
GCA_900608085.1ContigUWXH00000000
SAMEA4916093
ecoli021
GCA_900608065.1ContigUWXF00000000
SAMEA4916092
ecoli020
GCA_900608115.1ContigUWXK00000000
SAMEA4916096
ecoli023
GCA_900608105.1ContigUWXJ00000000
SAMEA4916095
ecoli022
GCA_900608045.1ContigUWXG00000000
SAMEA4916089
ecoli018
GCA_900608025.1ContigUWXC00000000
SAMEA4916087
ecoli017
GCA_900608195.1ContigUWXS00000000
SAMEA4916104
ecoli026
GCA_900608175.1ContigUWXQ00000000
SAMEA4916102
ecoli025
GCA_900608165.1ContigUWXP00000000
SAMEA4916101
ecoli024
GCA_900607665.1ContigUWVU00000000
SAMEA4916050
ecoli009
GCA_900607535.1ContigUWVO00000000
SAMEA4916043
ecoli008
GCA_900607785.1ContigUWWG00000000
SAMEA4916063
ecoli012
GCA_900607705.1ContigUWVZ00000000
SAMEA4916055
ecoli010
GCA_900607485.1ContigUWVK00000000
SAMEA4916040
ecoli007
GCA_900607465.1ContigUWVI00000000
SAMEA4916037
ecoli006
GCA_900607455.1ContigUWVJ00000000
SAMEA4916036
ecoli005
GCA_900607445.1ContigUWVG00000000
SAMEA4916035
ecoli004
GCA_900607365.1ContigUWVC00000000
SAMEA4916028
ecoli001
GCA_900607345.1ContigUWVA00000000
SAMEA4916027
ecoli000
GCA_900607725.1ContigUWWB00000000
SAMEA4916057
ecoli011
GCA_900607805.1ContigUWWH00000000
SAMEA4916065
ecoli013
GCA_900607975.1ContigUWWX00000000
SAMEA4916082
ecoli015
GCA_900607965.1ContigUWWW00000000
SAMEA4916081
ecoli014
GCA_900607995.1ContigUWWZ00000000
SAMEA4916084
ecoli016
GCA_900607395.1ContigUWVE00000000
SAMEA4916031
ecoli003
GCA_900607355.1ContigUWUZ00000000
SAMEA4916030
ecoli002
GCA_900607495.1ContigUWVL00000000
SAMEA4916039
kpneu007
GCA_900607555.1ContigUWVQ00000000
SAMEA4916045
kpneu011
GCA_900607385.1ContigUWZM00000000
SAMEA4916024
kpneu000
GCA_900607415.1ContigUWVD00000000
SAMEA4916029
kpneu003
GCA_900607985.1ContigUWWY00000000
SAMEA4916083
kpneu029
GCA_900607905.1ContigUWWQ00000000
SAMEA4916075
kpneu024
GCA_900607895.1ContigUWWP00000000
SAMEA4916074
kpneu023
GCA_900607955.1ContigUWWV00000000
SAMEA4916080
kpneu028
GCA_900607945.1ContigUWWU00000000
SAMEA4916079
kpneu027
GCA_900607935.1ContigUWWT00000000
SAMEA4916078
kpneu026
GCA_900607925.1ContigUWWS00000000
SAMEA4916077
kpneu025
GCA_900607795.1ContigUWWF00000000
SAMEA4916064
kpneu017
GCA_900607815.1ContigUWWJ00000000
SAMEA4916066
kpneu018
GCA_900607875.1ContigUWWN00000000
SAMEA4916072
kpneu022
GCA_900607865.1ContigUWWM00000000
SAMEA4916071
kpneu021
GCA_900607855.1ContigUWWL00000000
SAMEA4916070
kpneu020
GCA_900607835.1ContigUWWK00000000
SAMEA4916068
kpneu019
GCA_900607335.1ContigUWUY00000000
SAMEA4916026
kpneu002
GCA_900607375.1ContigUWUX00000000
SAMEA4916025
kpneu001
GCA_900607435.1ContigUWVH00000000
SAMEA4916034
kpneu006
GCA_900607425.1ContigUWVF00000000
SAMEA4916033
kpneu005
GCA_900607405.1ContigUWVB00000000
SAMEA4916032
kpneu004
GCA_900607685.1ContigUWVX00000000
SAMEA4916053
kpneu015
GCA_900607655.1ContigUWVV00000000
SAMEA4916052
kpneu014
GCA_900607675.1ContigUWVW00000000
SAMEA4916051
kpneu013
GCA_900607505.1ContigUWVM00000000
SAMEA4916042
kpneu009
GCA_900607515.1ContigUWVN00000000
SAMEA4916041
kpneu008
GCA_900607635.1ContigUWVT00000000
SAMEA4916048
kpneu012
GCA_900608155.1ContigUWXO00000000
SAMEA4916100
kpneu035
GCA_900608145.1ContigUWXN00000000
SAMEA4916099
kpneu034
GCA_900608135.1ContigUWXM00000000
SAMEA4916098
kpneu033
GCA_900608185.1ContigUWXR00000000
SAMEA4916103
kpneu036
GCA_900608215.1ContigUWXU00000000
SAMEA4916106
kpneu038
GCA_900608205.1ContigUWXT00000000
SAMEA4916105
kpneu037
GCA_900608015.1ContigUWXB00000000
SAMEA4916086
kpneu031
GCA_900608005.1ContigUWXA00000000
SAMEA4916085
kpneu030
GCA_900608075.1ContigUWXE00000000
SAMEA4916091
kpneu032
GCA_900608355.1ContigUWYF00000000
SAMEA4916120
kpneu048
GCA_900608325.1ContigUWYC00000000
SAMEA4916118
kpneu046
GCA_900608335.1ContigUWYD00000000
SAMEA4916117
kpneu045
GCA_900608315.1ContigUWYA00000000
SAMEA4916116
kpneu044
GCA_900608295.1ContigUWYB00000000
SAMEA4916115
kpneu043
GCA_900608285.1ContigUWXZ00000000
SAMEA4916114
kpneu042
GCA_900608275.1ContigUWXY00000000
SAMEA4916112
kpneu041
GCA_900608265.1ContigUWXW00000000
SAMEA4916111
kpneu040
GCA_900608245.1ContigUWXV00000000
SAMEA4916110
kpneu039
GCA_900608485.1ContigUWYR00000000
SAMEA4916133
kpneu058
GCA_900608475.1ContigUWYQ00000000
SAMEA4916132
kpneu057
GCA_900608465.1ContigUWYP00000000
SAMEA4916131
kpneu056
GCA_900608455.1ContigUWYO00000000
SAMEA4916130
kpneu055
GCA_900608445.1ContigUWYN00000000
SAMEA4916129
kpneu054
GCA_900608435.1ContigUWYM00000000
SAMEA4916128
kpneu053
GCA_900608415.1ContigUWYL00000000
SAMEA4916127
kpneu052
GCA_900608425.1ContigUWYK00000000
SAMEA4916126
kpneu051
GCA_900608395.1ContigUWYJ00000000
SAMEA4916125
kpneu050
GCA_900608405.1ContigUWYI00000000
SAMEA4916124
kpneu049
GCA_900608345.1ContigUWYE00000000
SAMEA4916119
kpneu047
GCA_900607715.1ContigUWWA00000000
SAMEA4916056
kpneu016
GCA_900607545.1ContigUWVP00000000
SAMEA4916044
kpneu010
GCA_900618335.1Complete genomeSAMEA4916123
paerg012
GCA_900618325.1Complete genomeSAMEA4916113
paerg011
GCA_900618305.1Complete genomeSAMEA4916107
paerg009
GCA_900618315.1Complete genomeSAMEA4916108
paerg010
GCA_900618285.1Complete genomeSAMEA4916069
paerg005
GCA_900618275.1Complete genomeSAMEA4916059
paerg003
GCA_900618265.1Complete genomeSAMEA4916061
paerg004
GCA_900618255.1Complete genomeSAMEA4916049
paerg002
GCA_900618245.1Complete genomeSAMEA4916038
paerg000
GCA_900608035.1ContigUWXD00000000
SAMEA4916088
paerg007
GCA_900608125.1ContigUWXL00000000
SAMEA4916097
paerg008
GCA_900607915.1ContigUWWR00000000
SAMEA4916076
paerg006
GCA_900607565.1ContigUWVR00000000
SAMEA4916046
paerg001
SRA Data Details
ParameterValue
Data volume, Gbases96
Data volume, Mbytes64317

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