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Accession: PRJNA359498 ID: 359498

Vagococcus

Genome sequencing and assembly of Vagococcus spp.

Select strains of various species within the Vagococcus genus were sequenced for a taxonomic evaluation

Accession	PRJNA359498
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Vagococcus[Taxonomy ID: 2737] Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus
Publications	Shewmaker PL et al., "Vagococcus bubulae sp. nov., isolated from ground beef, and Vagococcus vulneris sp. nov., isolated from a human foot wound.", Int J Syst Evol Microbiol, 2019 Aug;69(8):2268-2276
Submission	Registration date: 17-Dec-2018 Centers for Disease Control and Prevention
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	419
WGS master	12
SRA Experiments	12
Protein Sequences	28454
Publications
PubMed	1
Other datasets
BioSample	12
Assembly	12

Assembly details:

Assembly level

Number of Assemblies

Contig

12
12

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_003987655.1		NGKC00000000	SAMN06609010	LMG 24798	Vagococcus acidifermentans
GCA_003950315.1		NGJT00000000	SAMN06609019	SS1994	Vagococcus bubulae
GCA_003987635.1		NGKB00000000	SAMN06609011	SS1714	Vagococcus carniphilus
GCA_003987645.1		NGKA00000000	SAMN06609012	CCUG 51432	Vagococcus elongatus
GCA_003987595.1		NGJZ00000000	SAMN06609013	DSM 24756	Vagococcus entomophilus
GCA_003987565.1		NGJY00000000	SAMN06609014	CCUG 41755	Vagococcus fessus
GCA_003987575.1		NGJX00000000	SAMN06609015	NCDO 2497	Vagococcus fluvialis
GCA_003950325.1		PXZH00000000	SAMN08717810	JCM 31581	Vagococcus humatus
GCA_003987555.1		NGJW00000000	SAMN06609016	CCUG 39187	Vagococcus lutrae
GCA_003987515.1		NGJV00000000	SAMN06609017	LMG 24833	Vagococcus penaei
GCA_003987495.1		NGJU00000000	SAMN06609018	NCFB 2777	Vagococcus salmoninarum
GCA_003950515.1		NGJS00000000	SAMN06609020	SS1995	Vagococcus vulneris

SRA Data Details

Parameter	Value
Data volume, Gbases	10
Data volume, Mbytes	5731

Supplemental Content

Related information

Assembly
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Genome
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Nucleotide
Related Nucleotide entry
Protein
Related Proteins
PubMed
PubMed Links
Related Genes
Genes related to a genome project
SRA
All related SRA Experiments
Taxonomy
Taxonomy Links
WGS master
Link to WGS master record(s)

LinkOut to external resources

2884230229: Vagococcus bubulae SS1994 [Integrated Microbial Genomes]
2884230229: Vagococcus bubulae SS1994
Integrated Microbial Genomes
2894104560: Vagococcus fessus CCUG 41755 [Integrated Microbial Genomes]
2894104560: Vagococcus fessus CCUG 41755
Integrated Microbial Genomes
2881375749: Vagococcus entomophilus DSM 24756 [Integrated Microbial Genomes]
2881375749: Vagococcus entomophilus DSM 24756
Integrated Microbial Genomes

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Vagococcus
Vagococcus
Genome sequencing and assembly of Vagococcus spp.

BioProject
BioProject Links for Nucleotide (Select 1537083133) (1)
BioProject
Microbe sample from Vagococcus fessus
Microbe sample from Vagococcus fessus

biosample
BioSample links for Nucleotide (Select 1546817718) (1)
BioSample

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