U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from Nucleotide

Accession: PRJNA644637 ID: 644637

ISS Rodent Microbiome and Associated Samples

The microbiome of rodents and associated samples on the international space station Strains obtained from pure cultures. Not metagenomic assemblies
AccessionPRJNA644637
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 7-Jul-2020
Jet Propulsion Laboratory, California Institute of Technology
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)100
SRA Experiments95
Other datasets
BioSample107
Assembly100
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
54
46
100
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_020087035.1ScaffoldJADCQZ000000000SAMN15543699
FKII-L8-BK-P5
Acremonium sp. FKII-L8-BK-P5
GCA_019733465.1ScaffoldJACVQL000000000SAMN15705197
S/N-202-OC-R2
Actinotalea ferrariae
GCA_020284155.1ScaffoldJAILXE000000000SAMN15469709
R-IC-06-P1
Alternaria cf. alternata
GCA_020284075.1ScaffoldJAILXD000000000SAMN15469710
CBS 112.26
Aspergillus brunneus
GCA_020284055.1ScaffoldJAILXB000000000SAMN15469713
CBS 112.26
Aspergillus brunneus
GCA_019828945.1ScaffoldJACVQN000000000SAMN15793549
JS3-P1
Aspergillus croceus
GCA_019775315.1ScaffoldJACWGA000000000SAMN15543690
JS3-R5
Aspergillus sp. JS3-R5
GCA_019828785.1ScaffoldJACVQV000000000SAMN15705199
S/N-302-OC-P2
Aspergillus tubingensis
GCA_019827565.1ScaffoldJACVQM000000000SAMN15705204
JS3-P2
Aspergillus tubingensis
GCA_019827465.1ScaffoldJACVQS000000000SAMN15705200
S/N-304-OC-P1
Aspergillus tubingensis
GCA_019827445.1ScaffoldJACVQP000000000SAMN15705202
S/N-308-IC-B1
Aspergillus tubingensis
GCA_019827425.1ScaffoldJACVQO000000000SAMN15705203
JS3-R1
Aspergillus tubingensis
GCA_019805365.1ScaffoldJADQAX000000000SAMN15543683
VS III B KN t
Aspergillus tubingensis
GCA_020284045.1ScaffoldJAILXC000000000SAMN15469711
ATCC 9577
Aspergillus versicolor
GCA_019775405.1ScaffoldJACWFU000000000SAMN15543678
VS I D KN 2
Aureobasidium leucospermi
GCA_019748625.1ContigJACLIB000000000SAMN15705237
S/N-304-OC-R2
Bacillus aerophilus
GCA_019748615.1ContigJACLIA000000000SAMN15705238
S/N-302-OC-B4
Bacillus aerophilus
GCA_019748885.1ContigJACLPY000000000SAMN15705225
I1-B3
Bacillus cereus
GCA_019749315.1ScaffoldJACWFF000000000SAMN15543686
I1-R4
Bacillus cereus
GCA_019749015.1ContigJACLPZ000000000SAMN15705219
I2-B2
Bacillus cereus
GCA_019749375.1ScaffoldJACWFE000000000SAMN15543682
S/N-304-OC-R1
Bacillus sp. S/N-304-OC-R1
GCA_019748555.1ContigJACLBV000000000SAMN15705241
S/N-302-OC-B1
Bacillus subtilis
GCA_019748415.1ContigJACLBO000000000SAMN15705249
R-06-OCP2
Bacillus subtilis
GCA_019748655.1ContigJACLPX000000000SAMN15705239
S/N-302-OC-B3
Bacillus velezensis
GCA_019749155.1ContigJACLQB000000000SAMN15705210
J3-P2
Bacillus velezensis
GCA_019749135.1ContigJACLQA000000000SAMN15705211
JS3-R4
Bacillus velezensis
GCA_019749055.1ContigJACLCJ000000000SAMN15705216
JS1-R2
Brevibacillus agri
GCA_019749035.1ContigJACLCH000000000SAMN15705218
I2-B3
Brevibacillus brevis
GCA_019775475.1ScaffoldJACWFR000000000SAMN15543674
VS AB III KN 4
Cladosporium colombiae
GCA_019775635.1ScaffoldJACWFN000000000SAMN15543670
VS III D KN 1
Cladosporium sp. VS III D KN 1
GCA_019748535.1ContigJACLBU000000000SAMN15705242
S/N-208-OC-R1
Curtobacterium herbarum
GCA_019775485.1ScaffoldJACWFQ000000000SAMN15543673
VS AB III KN 2
Cystobasidium slooffiae
GCA_019775515.1ScaffoldJACWFP000000000SAMN15543672
VS AB III D KN 1
Cystobasidium slooffiae
GCA_019775285.1ScaffoldJACWFZ000000000SAMN15543689
I2-R3
Cystobasidium slooffiae
GCA_019748935.1ContigJACLCD000000000SAMN15705223
I2-R4
Cytobacillus firmus
GCA_019749345.1ScaffoldJACWFJ000000000SAMN15543687
I1-B1
Cytobacillus firmus
GCA_019828645.1ScaffoldJACVQX000000000SAMN15793540
VS III B KN 3
Leucosporidium yakuticum
GCA_019828615.1ScaffoldJACVQY000000000SAMN15793539
VS III A KN 4
Leucosporidium yakuticum
GCA_019775505.1ScaffoldJACWFO000000000SAMN15543671
VS III D KN 2
Leucosporidium yakuticum
GCA_019775565.1ScaffoldJACWFM000000000SAMN15543669
VS III C KN 2
Melanodothis sp. VS III C KN 2
GCA_019749255.1ScaffoldJACWFH000000000SAMN15543694
PL-B2
Mesobacillus maritimus
GCA_019749335.1ScaffoldJACWFI000000000SAMN15543685
I1-R3
Methylorubrum populi
GCA_019748515.1ContigJACLBS000000000SAMN15705244
S/N-202-IC-B1
Micrococcus luteus
GCA_019748545.1ContigJACLBR000000000SAMN15705245
S/N-202-OC-B6
Micrococcus luteus
GCA_019748495.1ContigJACLBT000000000SAMN15705243
S/N-204-IC-R2
Micrococcus luteus
GCA_019748725.1ContigJACLBY000000000SAMN15705233
S/N-308-OC-B3
Micrococcus luteus
GCA_020087025.1ScaffoldJADCQV000000000SAMN15543666
VS III B KN 2
Mrakiaceae sp. VS III B KN 2
GCA_019775845.1ScaffoldJADQAV000000000SAMN15543679
VS I D KN 1
Myrmaecium sp. VS I D KN 1
GCA_019775365.1ScaffoldJACWFY000000000SAMN15543688
I2-R1
Naganishia liquefaciens
GCA_019749295.1ScaffoldJACWFG000000000SAMN15543693
PL-B1
Neobacillus niacini
GCA_019748695.1ContigJACLIC000000000SAMN15705235
S/N-304-OC-R4
Paenibacillus cucumis (ex Kampfer et al. 2016)
GCA_019748775.1ContigJACLBX000000000SAMN15705234
S/N-304-OC-B1
Paenibacillus illinoisensis
GCA_019749165.1ContigJACLCM000000000SAMN15705212
JS3-R3
Paenibacillus polymyxa
GCA_019749115.1ContigJACLCL000000000SAMN15705214
J1-B
Paenibacillus polymyxa
GCA_019749095.1ContigJACLCK000000000SAMN15705215
JS1-P1
Paenibacillus polymyxa
GCA_019749075.1ContigJACLCI000000000SAMN15705217
JS1-R1
Paenibacillus polymyxa
GCA_019748915.1ContigJACLCC000000000SAMN15705224
I2-R2
Paenibacillus typhae
GCA_019749275.1ContigJACLCO000000000SAMN15705206
PL-R3
Paenibacillus xylanexedens
GCA_019828545.1ScaffoldJACVRA000000000SAMN15793536
OC-R06-R3
Paracamarosporium sp. OC-R06-R3
GCA_019748455.1ContigJACLBQ000000000SAMN15705246
S/N-202-OC-B2
Paracoccus yeei
GCA_019805375.1ScaffoldJADQAY000000000SAMN15543697
FJII-L10-SW-P1
Parengyodontium torokii
GCA_019828795.1ScaffoldJACVQW000000000SAMN15793541
S/N-302-OC-P1
Penicillium cf. chrysogenum
GCA_019827435.1ScaffoldJACVQT000000000SAMN15793544
S/N-302-OC-R3
Penicillium cf. chrysogenum
GCA_019827475.1ScaffoldJACVQR000000000SAMN15793546
S/N-308-OC-P1
Penicillium cf. chrysogenum
GCA_019828875.1ScaffoldJACVQU000000000SAMN15793543
S/N-302-OC-R1
Penicillium cf. chrysogenum
GCA_020284065.1ScaffoldJAILXA000000000SAMN15469714
S/N-308-OC-R5
Penicillium cf. chrysogenum
GCA_020284165.1ScaffoldJAILXF000000000SAMN15469708
NRRL 1841
Penicillium citrinum
GCA_019804555.1ContigJAETFU000000000SAMN15793535
VS AB I KN 5
Penicillium fuscoglaucum
GCA_019804545.1ContigJAETFT000000000SAMN15705196
S/N-202-OC-P2
Penicillium fuscoglaucum
GCA_019804565.1ScaffoldJAETFV000000000SAMN15793533
VS III D KN3.2
Penicillium robsamsonii
GCA_019775275.1ScaffoldJACWGB000000000SAMN15543691
VS AB III KN
Penicillium sp. VS AB III KN
GCA_019775305.1ScaffoldJACWGC000000000SAMN15543692
VS AB III KN 1
Penicillium sp. VS AB III KN 1
GCA_019775415.1ScaffoldJACWFT000000000SAMN15543677
VS I D KN
Penicillium sp. VS I D KN
GCA_019775465.1ScaffoldJACWFS000000000SAMN15543675
VS I D KN 3
Penicillium sp. VS I D KN 3
GCA_019748875.1ContigJACLIF000000000SAMN15705227
I1-R6
Peribacillus simplex
GCA_019748845.1ContigJACLCB000000000SAMN15705228
I1-R2
Priestia aryabhattai
GCA_019748835.1ContigJACLIG000000000SAMN15705226
I1-B2
Priestia aryabhattai
GCA_019748815.1ContigJACLIE000000000SAMN15705229
I1-P3
Priestia aryabhattai
GCA_019748795.1ContigJACLCA000000000SAMN15705230
I1-P2
Priestia aryabhattai
GCA_019748735.1ContigJACLID000000000SAMN15705231
I1-P1
Priestia aryabhattai
GCA_019748635.1ContigJACLBW000000000SAMN15705236
S/N-304-OC-R3
Priestia aryabhattai
GCA_019748995.1ContigJACLCE000000000SAMN15705222
I2-R5
Priestia aryabhattai
GCA_019748975.1ContigJACLCF000000000SAMN15705221
I2-P1
Priestia aryabhattai
GCA_019748955.1ContigJACLCG000000000SAMN15705220
I2-P2
Priestia aryabhattai
GCA_019749225.1ContigJACLII000000000SAMN15705207
PL-R2
Priestia aryabhattai
GCA_019749215.1ContigJACLCN000000000SAMN15705209
PL-P1
Priestia aryabhattai
GCA_019749195.1ContigJACLIH000000000SAMN15705208
PL-R1
Priestia aryabhattai
GCA_019748595.1ContigJACLPW000000000SAMN15705240
S/N-302-OC-B2
Priestia megaterium
GCA_019748425.1ContigJACLPV000000000SAMN15705248
S/N-202-OC-P3
Pseudomonas fulva
GCA_019748475.1ContigJACLBP000000000SAMN15705247
S/N-202-OC-R4
Pseudomonas fulva
GCA_019828915.1ContigJACVQQ000000000SAMN15705201
VS III A KN 2
Rhizopus arrhizus
GCA_019775385.1ScaffoldJACWFV000000000SAMN15543680
VS II D KN 4
Rhodotorula kratochvilovae
GCA_019775375.1ScaffoldJACWFW000000000SAMN15543681
VS III C KN 1
Rhodotorula kratochvilovae
GCA_019775605.1ScaffoldJACWFK000000000SAMN15543667
VS II B KN 4
Rhodotorula kratochvilovae
GCA_019775595.1ScaffoldJACWFL000000000SAMN15543668
VS II C KN 5
Rhodotorula kratochvilovae
GCA_019805405.1ScaffoldJADQAW000000000SAMN15543676
VS AB II KN 2
Rhodotorula mucilaginosa
GCA_019748715.1ContigJACLBZ000000000SAMN15705232
S/N-308-OC-B4
Sporosarcina aquimarina
GCA_019828575.1ScaffoldJACVQZ000000000SAMN15793537
OC-R06-P5
Talaromyces thailandensis
GCA_019828555.1ScaffoldJACVRB000000000SAMN15793534
R-O6-OCP3
Toxicocladosporium irritans
GCA_019775655.1ScaffoldJACWFX000000000SAMN15543684
VS III C KN 3
[Candida] anglica
SRA Data Details
ParameterValue
Data volume, Gbases220
Data volume, Mbytes73159

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center