mixed culture metagenome (ID 783807) - BioProject

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Accession: PRJDB12579 ID: 783807

mixed culture metagenome

Metagenomic sequencing of the NH3- or NO2- feeding DHS reactors

Metagenomic sequencing analysis was performed using the biomass collected from down-hanging-sponge (DHS) reactors fed with artificial seawater media containing NH3 or NO2-. The DHS reactors have been operated for more than 1 year without change of operational conditions.

Accession	PRJDB12579
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	mixed culture metagenome[Taxonomy ID: 1306859] unclassified sequences; metagenomes; ecological metagenomes; mixed culture metagenome
Submission	Registration date: 25-Nov-2021 Water Quality Control Lab, Division of Environmental Engineering, Faculty of Engineering, Hokkaido University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	8410
WGS master	30
SRA Experiments	2
Protein Sequences	96859
Other datasets
BioSample	32
Assembly	30

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

30
30

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_021604885.1	BQJV00000000	SAMD00422802	DHS20C19	Acidimicrobiales bacterium
GCA_021604905.1	BQJW00000000	SAMD00422803	DHS20C20	Ardenticatenaceae bacterium
GCA_021604845.1	BQJT00000000	SAMD00422800	DHS20C17	Cyclobacteriaceae bacterium
GCA_021604925.1	BQJX00000000	SAMD00422804	DHS20C21	Gemmatimonadota bacterium
GCA_021604625.1	BQJI00000000	SAMD00422789	DHS20C06	Hyphobacterium sp.
GCA_021604725.1	BQJN00000000	SAMD00422794	DHS20C11	Lysobacteraceae bacterium
GCA_021604605.1	BQJH00000000	SAMD00422788	DHS20C05	Marinicaulis sp.
GCA_021604585.1	BQJG00000000	SAMD00422787	DHS20C04	Marinicaulis sp.
GCA_021604645.1	BQJJ00000000	SAMD00422790	DHS20C07	Methyloligella sp.
GCA_021604545.1	BQJE00000000	SAMD00422785	DHS20C02	Micavibrio sp.
GCA_021604565.1	BQJF00000000	SAMD00422786	DHS20C03	Minwuia thermotolerans
GCA_021604485.1	BQJB00000000	SAMD00422782	NMNS02	Nitrosomonas sp.
GCA_021604405.1	BQJA00000000	SAMD00422781	NMNS01	Nitrosomonas sp.
GCA_021604505.1	BQJC00000000	SAMD00422783	NPINA01	Nitrospinaceae bacterium
GCA_021604365.1	BQIZ00000000	SAMD00422780	NPIRA06	Nitrospirales bacterium
GCA_021604265.1	BQIY00000000	SAMD00422779	NPIRA05	Nitrospirales bacterium
GCA_021604145.1	BQIX00000000	SAMD00422778	NPIRA04	Nitrospirales bacterium
GCA_021604105.1	BQIW00000000	SAMD00422777	NPIRA03	Nitrospirales bacterium
GCA_021604005.1	BQIV00000000	SAMD00422776	NPIRA02	Nitrospirales bacterium
GCA_021603905.1	BQIU00000000	SAMD00422775	NPIRA01	Nitrospirales bacterium
GCA_021604785.1	BQJQ00000000	SAMD00422797	DHS20C14	Phycisphaeraceae bacterium
GCA_021604825.1	BQJS00000000	SAMD00422799	DHS20C16	Phycisphaerae bacterium
GCA_021604805.1	BQJR00000000	SAMD00422798	DHS20C15	Planctomycetota bacterium
GCA_021604745.1	BQJO00000000	SAMD00422795	DHS20C12	Pseudohongiella sp.
GCA_021604665.1	BQJK00000000	SAMD00422791	DHS20C08	Rhodomicrobium sp.
GCA_021604865.1	BQJU00000000	SAMD00422801	DHS20C18	Saprospiraceae bacterium
GCA_021604765.1	BQJP00000000	SAMD00422796	DHS20C13	Thermodesulfobacteriota bacterium
GCA_021604705.1	BQJM00000000	SAMD00422793	DHS20C10	marine bacterium B5-7
GCA_021604685.1	BQJL00000000	SAMD00422792	DHS20C09	marine bacterium B5-7
GCA_021604525.1	BQJD00000000	SAMD00422784	DHS20C01	marine bacterium B5-7

SRA Data Details

Parameter	Value
Data volume, Gbases	35
Data volume, Mbytes	23555

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mixed culture metagenome

Metagenomic sequencing of the NH3- or NO2- feeding DHS reactors

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