Lactic acid bacteria (ID 833940) - BioProject

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Accession: PRJNA833940 ID: 833940

WGS of florfenicol-resistant lactic acid bacteria isolates from BARF pet food

Accession	PRJNA833940
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Nüesch-Inderbinen M et al., "High occurrence of Enterococcus faecalis, Enterococcus faecium, and Vagococcus lutrae harbouring oxazolidinone resistance genes in raw meat-based diets for companion animals – a public health issue, Switzerland, September 2018 to May 2020", Eurosurveillance, 2023;28(6)
Submission	Registration date: 2-May-2022 University of Zurich
Relevance	Environmental

Project Data:

Assembly level

Number of Assemblies

27
27

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_023300025.1	3	SAMN28025459	AT41	Enterococcus faecalis
GCA_023299705.1	2	SAMN28025455	AT34	Enterococcus faecalis
GCA_023299685.1	3	SAMN28025451	AT22	Enterococcus faecalis
GCA_023299665.1	2	SAMN28025452	AT29	Enterococcus faecalis
GCA_023299645.1	2	SAMN28025468	AT50	Enterococcus faecalis
GCA_023299625.1	4	SAMN28025456	AT39	Enterococcus faecalis
GCA_023299605.1	2	SAMN28025463	AT46a	Enterococcus faecalis
GCA_023299585.1	3	SAMN28025457	AT40a	Enterococcus faecalis
GCA_023300165.1	2	SAMN28025447	AT04	Enterococcus faecalis
GCA_023299545.1	3	SAMN28025448	AT09	Enterococcus faecalis
GCA_023299525.1	2	SAMN28025471	LS06-1	Enterococcus faecalis
GCA_023299505.1	4	SAMN28025458	AT40b	Enterococcus faecalis
GCA_023299485.1	2	SAMN28025470	LS05-2	Enterococcus faecalis
GCA_023299465.1	2	SAMN28025469	LS05-1	Enterococcus faecalis
GCA_023299425.1	4	SAMN28025466	AT48	Enterococcus faecalis
GCA_023299785.1	1	SAMN28025460	AT43a	Enterococcus faecalis
GCA_023299225.1	3	SAMN28025467	AT49a	Enterococcus faecalis
GCA_023299745.1	3	SAMN28025461	AT44	Enterococcus faecium
GCA_023299725.1	5	SAMN28025462	AT45b	Enterococcus faecium
GCA_023299325.1	3	SAMN28025465	AT47b	Enterococcus faecium
GCA_023299805.1	5	SAMN28025445	AT02	Enterococcus faecium
GCA_023299185.1	3	SAMN28025464	AT46b	Vagococcus lutrae
GCA_023299765.1	1	SAMN28025453	AT32	Vagococcus lutrae
GCA_023299445.1	1	SAMN28025454	AT33	Vagococcus lutrae
GCA_023299345.1	2	SAMN28025450	AT19	Vagococcus lutrae
GCA_023300045.1	4	SAMN28025446	AT03	Vagococcus lutrae
GCA_023299565.1	3	SAMN28025449	AT15	Vagococcus lutrae

Parameter	Value
Data volume, Gbases	16
Data volume, Mbytes	10105