ID 840722 - BioProject

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Accession: PRJEB52635 ID: 840722

EMG produced TPA metagenomics assembly of PRJNA728379 data set (Metagenome of pig fecal bacteria).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA728379, and was assembled with metaSPAdes v3. More...

Accession	PRJEB52635
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 20-May-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2928
WGS master	186
Publications
PubMed	1
PMC	1
Other datasets
BioSample	186
Assembly	186

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

186
186

Assembly	WGS	BioSample	Taxonomy
GCA_945638835.1	CALZDY000000000	SAMEA110322021	Acinetobacter lwoffii
GCA_945610665.1	CALYZW000000000	SAMEA110321939	Aerococcus urinaeequi
GCA_945639035.1	CALZEA000000000	SAMEA110322032	Chlamydia suis
GCA_945614095.1	CALZAL000000000	SAMEA110321945	Escherichia coli
GCA_945630165.1	CALZCP000000000	SAMEA110322035	Jeotgalibaca dankookensis
GCA_945636515.1	CALZCZ000000000	SAMEA110322078	Lactobacillus amylovorus
GCA_945638655.1	CALZDT000000000	SAMEA110322045	Lactobacillus johnsonii
GCA_945638905.1	CALZEC000000000	SAMEA110322033	Megasphaera elsdenii
GCA_945645595.1	CALZFF000000000	SAMEA110321972	Methanobrevibacter gottschalkii
GCA_945650115.1	CALZFV000000000	SAMEA110321985	Methanobrevibacter ruminantium
GCA_945607175.1	CALYYY000000000	SAMEA110321948	Methanobrevibacter smithii
GCA_945639945.1	CALZEM000000000	SAMEA110321965	Oceanisphaera avium
GCA_945639145.1	CALZED000000000	SAMEA110321971	Psychrobacter pasteurii
GCA_945616265.1	CALZBD000000000	SAMEA110321924	Ruminococcus flavefaciens
GCA_945615915.1	CALZBA000000000	SAMEA110321941	Turicibacter sanguinis
GCA_945606095.1	CALYYS000000000	SAMEA110321932	uncultured Acetitomaculum sp.
GCA_945609935.1	CALYZP000000000	SAMEA110321991	uncultured Alphaproteobacteria bacterium
GCA_945639745.1	CALZEK000000000	SAMEA110321973	uncultured Bacillaceae bacterium
GCA_945607565.1	CALYZD000000000	SAMEA110321999	uncultured Bacteroidales bacterium
GCA_945639285.1	CALZEG000000000	SAMEA110322022	uncultured Bacteroidales bacterium
GCA_945636785.1	CALZDD000000000	SAMEA110322030	uncultured Bacteroidales bacterium
GCA_945649915.1	CALZFU000000000	SAMEA110322047	uncultured Bacteroidales bacterium
GCA_945605935.1	CALYYR000000000	SAMEA110322010	uncultured Bacteroidales bacterium
GCA_945623735.1	CALZCB000000000	SAMEA110321980	uncultured Bacteroidales bacterium
GCA_945608585.1	CALYZG000000000	SAMEA110321914	uncultured Bacteroidales bacterium
GCA_945631515.1	CALZCS000000000	SAMEA110322070	uncultured Bacteroidales bacterium
GCA_945608665.1	CALYZJ000000000	SAMEA110321920	uncultured Bacteroidales bacterium
GCA_945648405.1	CALZFN000000000	SAMEA110322073	uncultured Bacteroidales bacterium
GCA_945608545.1	CALYZH000000000	SAMEA110321918	uncultured Bacteroidales bacterium
GCA_945638185.1	CALZDN000000000	SAMEA110322085	uncultured Bacteroidales bacterium
GCA_945608995.1	CALYZM000000000	SAMEA110321909	uncultured Bacteroidales bacterium
GCA_945624775.1	CALZCG000000000	SAMEA110322036	uncultured Bacteroidales bacterium
GCA_945623555.1	CALZCA000000000	SAMEA110321974	uncultured Bacteroidales bacterium
GCA_945636545.1	CALZDA000000000	SAMEA110322077	uncultured Bacteroidales bacterium
GCA_945618645.1	CALZBH000000000	SAMEA110321995	uncultured Bacteroidales bacterium
GCA_945610395.1	CALYZT000000000	SAMEA110322016	uncultured Bacteroidales bacterium
GCA_945614715.1	CALZAQ000000000	SAMEA110321913	uncultured Bacteroidales bacterium
GCA_945638535.1	CALZDQ000000000	SAMEA110322051	uncultured Bacteroidales bacterium
GCA_945615335.1	CALZAT000000000	SAMEA110321907	uncultured Bacteroidales bacterium
GCA_945615645.1	CALZAV000000000	SAMEA110321993	uncultured Bacteroidales bacterium
GCA_945616435.1	CALZBE000000000	SAMEA110321912	uncultured Bacteroidales bacterium
GCA_945637335.1	CALZDH000000000	SAMEA110322079	uncultured Bacteroidales bacterium
GCA_945608555.1	CALYZI000000000	SAMEA110321910	uncultured Bacteroidales bacterium
GCA_945607915.1	CALYZF000000000	SAMEA110321916	uncultured Bacteroidales bacterium
GCA_945606275.1	CALYYU000000000	SAMEA110322012	uncultured Bacteroidales bacterium
GCA_945631425.1	CALZCQ000000000	SAMEA110322069	uncultured Bacteroidales bacterium
GCA_945620555.1	CALZBP000000000	SAMEA110321981	uncultured Bacteroidales bacterium
GCA_945648435.1	CALZFO000000000	SAMEA110322088	uncultured Bacteroidales bacterium
GCA_945611095.1	CALZAA000000000	SAMEA110322017	uncultured Bacteroidales bacterium
GCA_945645955.1	CALZFL000000000	SAMEA110322080	uncultured Bacteroidales bacterium
GCA_945607605.1	CALYZE000000000	SAMEA110321921	uncultured Bacteroides sp.
GCA_945646205.1	CALZFM000000000	SAMEA110322020	uncultured Bacteroides sp.
GCA_945623225.1	CALZBZ000000000	SAMEA110322007	uncultured Butyrivibrio sp.
GCA_945638575.1	CALZDP000000000	SAMEA110322062	uncultured Clostridia bacterium
GCA_945639375.1	CALZEJ000000000	SAMEA110322055	uncultured Clostridia bacterium
GCA_945641235.1	CALZES000000000	SAMEA110321990	uncultured Clostridia bacterium
GCA_945645125.1	CALZFD000000000	SAMEA110321986	uncultured Clostridia bacterium
GCA_945609415.1	CALYZO000000000	SAMEA110321957	uncultured Clostridia bacterium
GCA_945607665.1	CALYZB000000000	SAMEA110321926	uncultured Clostridia bacterium
GCA_945641305.1	CALZEU000000000	SAMEA110321979	uncultured Clostridia bacterium
GCA_945614165.1	CALZAM000000000	SAMEA110322002	uncultured Clostridia bacterium
GCA_945644115.1	CALZEY000000000	SAMEA110322052	uncultured Clostridia bacterium
GCA_945607415.1	CALYZA000000000	SAMEA110321951	uncultured Clostridia bacterium
GCA_945613045.1	CALZAG000000000	SAMEA110321964	uncultured Clostridia bacterium
GCA_945619825.1	CALZBL000000000	SAMEA110321935	uncultured Clostridia bacterium
GCA_945638595.1	CALZDR000000000	SAMEA110322064	uncultured Clostridia bacterium
GCA_945644815.1	CALZFA000000000	SAMEA110321988	uncultured Clostridia bacterium
GCA_945611605.1	CALZAC000000000	SAMEA110321923	uncultured Clostridia bacterium
GCA_945615505.1	CALZAU000000000	SAMEA110321956	uncultured Clostridia bacterium
GCA_945628325.1	CALZCM000000000	SAMEA110321969	uncultured Clostridia bacterium
GCA_945635805.1	CALZCW000000000	SAMEA110322054	uncultured Clostridia bacterium
GCA_945622055.1	CALZBV000000000	SAMEA110321955	uncultured Clostridia bacterium
GCA_945615925.1	CALZAY000000000	SAMEA110321943	uncultured Clostridia bacterium
GCA_945628035.1	CALZCK000000000	SAMEA110322019	uncultured Clostridia bacterium
GCA_945615945.1	CALZAZ000000000	SAMEA110321946	uncultured Clostridia bacterium
GCA_945608855.1	CALYZL000000000	SAMEA110321931	uncultured Clostridia bacterium
GCA_945618845.1	CALZBI000000000	SAMEA110321936	uncultured Clostridia bacterium
GCA_945637665.1	CALZDM000000000	SAMEA110322060	uncultured Clostridia bacterium
GCA_945624245.1	CALZCE000000000	SAMEA110322050	uncultured Clostridia bacterium
GCA_945621755.1	CALZBT000000000	SAMEA110321958	uncultured Clostridia bacterium
GCA_945631675.1	CALZCT000000000	SAMEA110321961	uncultured Clostridia bacterium
GCA_945614015.1	CALZAK000000000	SAMEA110321940	uncultured Clostridia bacterium
GCA_945610795.1	CALYZX000000000	SAMEA110321937	uncultured Clostridia bacterium
GCA_945622955.1	CALZBY000000000	SAMEA110322008	uncultured Clostridia bacterium
GCA_945615735.1	CALZAW000000000	SAMEA110321959	uncultured Clostridium sp.
GCA_945639235.1	CALZEH000000000	SAMEA110322065	uncultured Clostridium sp.
GCA_945627985.1	CALZCJ000000000	SAMEA110321968	uncultured Clostridium sp.
GCA_945610215.1	CALYZR000000000	SAMEA110322003	uncultured Clostridium sp.
GCA_945631445.1	CALZCR000000000	SAMEA110322061	uncultured Corynebacterium sp.
GCA_945649885.1	CALZFS000000000	SAMEA110322058	uncultured Corynebacterium sp.
GCA_945641135.1	CALZEP000000000	SAMEA110322034	uncultured Dialister sp.
GCA_945645795.1	CALZFH000000000	SAMEA110322029	uncultured Erysipelotrichaceae bacterium
GCA_945648485.1	CALZFR000000000	SAMEA110322087	uncultured Eubacterium sp.
GCA_945616155.1	CALZBB000000000	SAMEA110321950	uncultured Fibrobacter sp.
GCA_945606225.1	CALYYT000000000	SAMEA110322013	uncultured Fibrobacter sp.
GCA_945611005.1	CALYZZ000000000	SAMEA110322001	uncultured Firmicutes bacterium
GCA_945612235.1	CALZAE000000000	SAMEA110321953	uncultured Gammaproteobacteria bacterium
GCA_945641205.1	CALZEO000000000	SAMEA110321970	uncultured Gammaproteobacteria bacterium
GCA_945637515.1	CALZDJ000000000	SAMEA110322023	uncultured Gammaproteobacteria bacterium
GCA_945608675.1	CALYZK000000000	SAMEA110321911	uncultured Ignatzschineria sp.
GCA_945619025.1	CALZBJ000000000	SAMEA110321915	uncultured Ignatzschineria sp.
GCA_945639195.1	CALZEE000000000	SAMEA110322043	uncultured Ignatzschineria sp.
GCA_945641335.1	CALZET000000000	SAMEA110321994	uncultured Lachnospiraceae bacterium
GCA_945610435.1	CALYZU000000000	SAMEA110322011	uncultured Lachnospiraceae bacterium
GCA_945643825.1	CALZEZ000000000	SAMEA110322057	uncultured Lachnospiraceae bacterium
GCA_945623865.1	CALZCD000000000	SAMEA110321967	uncultured Lachnospiraceae bacterium
GCA_945645385.1	CALZFE000000000	SAMEA110321966	uncultured Lachnospiraceae bacterium
GCA_945614845.1	CALZAR000000000	SAMEA110321906	uncultured Lachnospiraceae bacterium
GCA_945609985.1	CALYZQ000000000	SAMEA110321975	uncultured Lachnospiraceae bacterium
GCA_945609375.1	CALYZN000000000	SAMEA110321908	uncultured Lachnospiraceae bacterium
GCA_945645625.1	CALZFI000000000	SAMEA110322024	uncultured Lachnospiraceae bacterium
GCA_945621435.1	CALZBR000000000	SAMEA110321984	uncultured Lachnospiraceae bacterium
GCA_945636165.1	CALZCY000000000	SAMEA110322063	uncultured Lachnospiraceae bacterium
GCA_945636655.1	CALZDC000000000	SAMEA110322067	uncultured Lachnospiraceae bacterium
GCA_945644865.1	CALZFB000000000	SAMEA110321976	uncultured Lachnospiraceae bacterium
GCA_945620125.1	CALZBM000000000	SAMEA110321930	uncultured Lactobacillus sp.
GCA_945640905.1	CALZEN000000000	SAMEA110322037	uncultured Lactobacillus sp.
GCA_945641355.1	CALZEQ000000000	SAMEA110321996	uncultured Mediterranea sp.
GCA_945610825.1	CALYZY000000000	SAMEA110322006	uncultured Mollicutes bacterium
GCA_945637315.1	CALZDG000000000	SAMEA110322072	uncultured Mollicutes bacterium
GCA_945628165.1	CALZCL000000000	SAMEA110321962	uncultured Mycoplasmatota bacterium
GCA_945614315.1	CALZAO000000000	SAMEA110321938	uncultured Mycoplasmatota bacterium
GCA_945607685.1	CALYZC000000000	SAMEA110322005	uncultured Parabacteroides sp.
GCA_945611775.1	CALZAD000000000	SAMEA110321929	uncultured Planctomycetaceae bacterium
GCA_945626465.1	CALZCI000000000	SAMEA110322048	uncultured Porphyromonadaceae bacterium
GCA_945638945.1	CALZDZ000000000	SAMEA110322028	uncultured Prevotella sp.
GCA_945641125.1	CALZER000000000	SAMEA110322031	uncultured Prevotella sp.
GCA_945606505.1	CALYYW000000000	SAMEA110321919	uncultured Prevotella sp.
GCA_945637645.1	CALZDK000000000	SAMEA110322049	uncultured Prevotella sp.
GCA_945615845.1	CALZAX000000000	SAMEA110321952	uncultured Prevotella sp.
GCA_945637735.1	CALZDL000000000	SAMEA110322084	uncultured Prevotella sp.
GCA_945645815.1	CALZFK000000000	SAMEA110322090	uncultured Prevotella sp.
GCA_945622605.1	CALZBW000000000	SAMEA110322015	uncultured Prevotella sp.
GCA_945614335.1	CALZAP000000000	SAMEA110321998	uncultured Prevotella sp.
GCA_945643725.1	CALZEV000000000	SAMEA110322074	uncultured Prevotella sp.
GCA_945645545.1	CALZFG000000000	SAMEA110322081	uncultured Prevotella sp.
GCA_945630065.1	CALZCO000000000	SAMEA110322041	uncultured Prevotella sp.
GCA_945635545.1	CALZCV000000000	SAMEA110322086	uncultured Prevotella sp.
GCA_945645715.1	CALZFJ000000000	SAMEA110322027	uncultured Prevotellaceae bacterium
GCA_945643815.1	CALZEX000000000	SAMEA110322076	uncultured Prevotellaceae bacterium
GCA_945638405.1	CALZDO000000000	SAMEA110322068	uncultured Prevotellaceae bacterium
GCA_945638645.1	CALZDU000000000	SAMEA110322066	uncultured Prevotellaceae bacterium
GCA_945616195.1	CALZBC000000000	SAMEA110321925	uncultured Pseudomonadaceae bacterium
GCA_945607035.1	CALYYX000000000	SAMEA110321947	uncultured Pseudomonadaceae bacterium
GCA_945615095.1	CALZAS000000000	SAMEA110321949	uncultured Psychrobacillus sp.
GCA_945643845.1	CALZEW000000000	SAMEA110322038	uncultured Psychrobacter sp.
GCA_945607165.1	CALYYZ000000000	SAMEA110321944	uncultured Ruminococcus sp.
GCA_945632055.1	CALZCU000000000	SAMEA110322046	uncultured Ruminococcus sp.
GCA_945614185.1	CALZAN000000000	SAMEA110321933	uncultured Ruminococcus sp.
GCA_945616705.1	CALZBG000000000	SAMEA110321982	uncultured Ruminococcus sp.
GCA_945624235.1	CALZCF000000000	SAMEA110322025	uncultured Ruminococcus sp.
GCA_945638695.1	CALZDV000000000	SAMEA110322053	uncultured Ruminococcus sp.
GCA_945637225.1	CALZDE000000000	SAMEA110322091	uncultured Selenomonadaceae bacterium
GCA_945620165.1	CALZBO000000000	SAMEA110321928	uncultured Solobacterium sp.
GCA_945620965.1	CALZBQ000000000	SAMEA110321992	uncultured Spirochaetales bacterium
GCA_945636115.1	CALZCX000000000	SAMEA110322071	uncultured Streptococcus sp.
GCA_945648455.1	CALZFQ000000000	SAMEA110322082	uncultured Succinatimonas sp.
GCA_945606365.1	CALYYV000000000	SAMEA110322014	uncultured Treponema sp.
GCA_945610475.1	CALYZV000000000	SAMEA110322000	uncultured Treponema sp.
GCA_945638915.1	CALZDX000000000	SAMEA110321963	uncultured Treponema sp.
GCA_945639785.1	CALZEL000000000	SAMEA110321977	uncultured Treponema sp.
GCA_945636525.1	CALZDB000000000	SAMEA110322089	uncultured Treponema sp.
GCA_945650035.1	CALZFT000000000	SAMEA110322056	uncultured Treponema sp.
GCA_945628395.1	CALZCN000000000	SAMEA110321983	uncultured Treponema sp.
GCA_945624755.1	CALZCH000000000	SAMEA110322039	uncultured Treponema sp.
GCA_945616455.1	CALZBF000000000	SAMEA110321917	uncultured Treponema sp.
GCA_945639175.1	CALZEF000000000	SAMEA110322018	uncultured Treponema sp.
GCA_945613695.1	CALZAI000000000	SAMEA110321942	uncultured Treponema sp.
GCA_945611455.1	CALZAB000000000	SAMEA110321927	uncultured Treponema sp.
GCA_945637295.1	CALZDI000000000	SAMEA110322059	uncultured Treponema sp.
GCA_945648475.1	CALZFP000000000	SAMEA110322083	uncultured Veillonellaceae bacterium
GCA_945613785.1	CALZAJ000000000	SAMEA110321960	uncultured Verrucomicrobiota bacterium
GCA_945613035.1	CALZAH000000000	SAMEA110321954	uncultured Verrucomicrobiota bacterium
GCA_945622675.1	CALZBX000000000	SAMEA110322009	uncultured Verrucomicrobiota bacterium
GCA_945621885.1	CALZBU000000000	SAMEA110321987	uncultured bacterium
GCA_945639275.1	CALZEI000000000	SAMEA110322040	uncultured bacterium
GCA_945619165.1	CALZBK000000000	SAMEA110321934	uncultured bacterium
GCA_945638885.1	CALZEB000000000	SAMEA110321989	uncultured bacterium
GCA_945623835.1	CALZCC000000000	SAMEA110322044	uncultured bacterium
GCA_945638585.1	CALZDS000000000	SAMEA110322042	uncultured bacterium
GCA_945610235.1	CALYZS000000000	SAMEA110321997	uncultured bacterium
GCA_945637255.1	CALZDF000000000	SAMEA110322075	uncultured bacterium
GCA_945612775.1	CALZAF000000000	SAMEA110322004	uncultured bacterium
GCA_945620135.1	CALZBN000000000	SAMEA110321922	uncultured bacterium
GCA_945621445.1	CALZBS000000000	SAMEA110321978	uncultured bacterium
GCA_945638775.1	CALZDW000000000	SAMEA110322026	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA728379 data set (Metagenome of pig fecal bacteria).

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