Metagenomic survey of viruses, and other sub-viral agents associated with tomatoes and weed plants at the immediate surroundings of tomato-growing areas in Slovenia.
| Accession | PRJNA772045 |
| Data Type | Genome sequencing |
| Scope | Multispecies |
| Publications (total 4) Less... | - Published online: Rivarez M et al., "In-depth study of tomato and weed viromes reveals undiscovered plant virus diversity in an agroecosystem", bioRxiv, 2022;
- Published online: Temple C et al., "Biological and genetic characterization of Physostegia chlorotic mottle virus in Europe based on host range, location, and time.", Plant Disease, 2022;
- Published online: Rivarez M et al., "First Report of Ranunculus White Mottle Ophiovirus in Slovenia in Pepper with Yellow Leaf Curling Symptom and in Tomato", Plant Disease, 2022;106(7)
- Published online: Rivarez M et al., "Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing", Frontiers in Microbiology, 2021;12
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| Grants | - "Biotechnology and Systems Biology of Plants" (Grant ID P4-0165, P4-0407, Slovenian Research Agency)
- "Innovative network for next generation training and sequencing of the virome (INEXTVIR)" (Grant ID GA 813542, European Union)
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| Submission | Registration date: 18-Oct-2021
Innovative network for next generation training and sequencing of the virome |
| Related Resources | |
| Relevance | Agricultural |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| Nucleotide (total) | 356 |
| Genomic DNA | 3 |
| Genomic RNA | 353 |
| SRA Experiments | 71 |
| Protein Sequences | 855 |
| Other datasets |
| BioSample | 71 |
| Assembly | 76 |