Zea mays isolate:inbred line RP125 (ID 598426) - BioProject

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Accession: PRJNA598426 ID: 598426

Zea mays isolate:inbred line RP125

Zea mays RP125 Genome sequencing and assembly

See Genome Information for Zea mays

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The genome assembly and annotation of RP125

Using Nanopore long reads, Illumina short reads, and Hi-C data to assemble the genome of maize inbred line, RP125. Using RNAseq data to annotate the assembly.

Accession	PRJNA598426
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Zea mays[Taxonomy ID: 4577] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea; Zea mays
Publications	Nie S et al., "Genome assembly of the Chinese maize elite inbred line RP125 and its EMS mutant collection provide new resources for maize genetics research and crop improvement.", Plant J, 2021 Oct;108(1):40-54
Submission	Registration date: 19-Aug-2022 Shandong Agricultural University
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	11
WGS master	1
SRA Experiments	42
Publications
PubMed	1
Other datasets
BioSample	11
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_024718635.1	Chromosome	JANPXB000000000	10	SAMN13705195	Zea mays

SRA Data Details

Parameter	Value
Data volume, Gbases	751
Data volume, Tbytes	0.36

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Zea mays isolate:inbred line RP125

Zea mays RP125 Genome sequencing and assembly

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