Gossypium (ID 788082) - BioProject

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Accession: PRJNA788082 ID: 788082

See Genome Information for Gossypium raimondii

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21 additional projects are related by organism.

The oxford nanopore sequencing and illumina sequencing data of multiple diploid Gossypium species for genome assembly

Accession	PRJNA788082
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Gossypium[Taxonomy ID: 3633] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Publications (total 3) Less...	Wang M et al., "Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium.", Nat Genet, 2022 Dec;54(12):1959-1971 More... Wang M et al., "Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium.", Nat Genet, 2022 Dec;54(12):1959-1971 Chen Z et al., "Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A-genome species as cytoplasmic donor of the allotetraploid species.", Plant Biol (Stuttg), 2017 May;19(3):484-493 Xu Q et al., "Analysis of complete nucleotide sequences of 12 Gossypium chloroplast genomes: origin and evolution of allotetraploids.", PLoS One, 2012;7(8):e37128 Less...
Submission	Registration date: 30-Sep-2022 Huazhong Agricultural University
Relevance	Evolution

Project Data:

Assembly level

Number of Assemblies

10
10

Assembly	WGS	Chrs	BioSample	Isolate	Taxonomy
GCA_025698475.1	JAOWAC000000000	13	SAMN30903773	GPB1lz	Gossypium anomalum
GCA_025698485.2	JAOWAB000000000	13	SAMN30903772	Shixiya-1	Gossypium arboreum
GCA_025503065.1		13	SAMN30903778	GPG1lz	Gossypium bickii
GCA_025502765.1		13	SAMN30903770	Zhongcao1	Gossypium herbaceum
GCA_025502795.1		13	SAMN30903771	GPA1alz	Gossypium herbaceum
GCA_025698465.1	JAOWAG000000000	13	SAMN30903777	GPF1lz	Gossypium longicalyx
GCA_025698545.1	JAOWAE000000000	13	SAMN30903775	GPD5lz	Gossypium raimondii
GCA_025506655.1		13	SAMN30903779	GPK201	Gossypium rotundifolium
GCA_025698495.1	JAOWAF000000000	13	SAMN30903776	GPE1lz	Gossypium stocksii
GCA_025698515.1	JAOWAD000000000	13	SAMN30903774	GPC1lz	Gossypium sturtianum

Parameter	Value
Data volume, Gbases	2,449
Data volume, Tbytes	1.67

Related RefSeq Project

PRJNA907401 : Gossypium RefSeq Genome sequencing and assembly