Komagataella phaffii GS115 (ID 37871) - BioProject

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Accession: PRJEA37871 ID: 37871

Komagataella phaffii GS115

Genome sequencing

See Genome Information for Komagataella pastoris

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27 additional projects are related by organism.

The Unit for Molecular Glycobiology, Department for Molecular Biomedical Research, VIB, UGent, Belgium sequenced the Komagataella pastoris strain GS115 genome at 20X genome coverage using whole genome shotgun (WGS) sequencing. They assembled the sequence of Komagataella pastoris strain GS115 into 4 chromosomes.They provide manually curated annotation for more then 5,000 protein-coding genes.

Accession	PRJEA37871
Data Type	Genome sequencing
Scope	Monoisolate
Organism	Komagataella phaffii GS115[Taxonomy ID: 644223] Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Pichiales; Pichiaceae; Komagataella; Komagataella phaffii; Komagataella phaffii GS115
Publications	De Schutter K et al., "Genome sequence of the recombinant protein production host Pichia pastoris.", Nat Biotechnol, 2009 Jun;27(6):561-6
Submission	Registration date: 25-May-2009 - Unit for Molecular Glycobiology, Department for Molecular Biomedical Research, VIB, UGent, Belgium - Laboratory for Bioinformatics and Evolutionary Genomics VIB, UGent.
Locus Tag Prefix	PAS

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	7
SRA Experiments	2
Protein Sequences	5077
Publications
PubMed	1
Other datasets
BioSample	2
Assembly	1

Assembly details:

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Assembly	Level	Chrs	BioSample	Taxonomy
GCA_000027005.1	Chromosome	4	SAMEA2272385	Komagataella phaffii GS115

SRA Data Details

Parameter	Value
Data volume, Mbases	146
Data volume, Mbytes	320

Related RefSeq Project

PRJNA39439 : Komagataella phaffii GS115 RefSeq Genome

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LinkOut to external resources

GOLD: Gp0004868 [Genomes On Line Database]
GOLD: Gp0004868
Genomes On Line Database
645666419: Komagataella pastoris GS115 [Integrated Microbial Genomes]
645666419: Komagataella pastoris GS115
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Komagataella phaffii GS115
Komagataella phaffii GS115
Genome sequencing

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GSE15481[ACCN] AND gsm[ETYP] (15)
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KLHL5 kelch like family member 5 [Homo sapiens]
KLHL5 kelch like family member 5 [Homo sapiens]
Gene ID:51088

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Gene Links for Nucleotide (Select 62087219) (1)
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