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Accession: PRJNA17973 ID: 17973

Populus trichocarpa (black cottonwood)

Fast growing tree being used as a model for molecular tree biology, first forest tree to be sequenced

See Genome Information for Populus trichocarpa
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6241 additional projects are related by organism.
The poplar reference sequence (Refseq) genome is provided by NCBI using WGS sequence and assembly instructions provided by the Joint Genome Institute.

For additional information, please see the RefSeq Project chapter in the NCBI Handbook.

AccessionPRJNA17973
Data TypeRefSeq Genome
ScopeMonoisolate
OrganismPopulus trichocarpa[Taxonomy ID: 3694]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa
PublicationsTuskan GA et al., "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).", Science, 2006 Sep 15;313(5793):1596-604
SubmissionRegistration date: 9-Oct-2006
US DOE Joint Genome Institute (JGI
- DOE Joint Genome Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)59624
Transcript59500
Protein Sequences51742
Publications
PubMed1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCF_000002775.5ChromosomeAARH00000000
20
SAMN02953657
Populus trichocarpa
Related GenBank Project
PRJNA10772 : Genome sequencing of Populus trichocarpa, first tree genome to be sequenced

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