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Accession: PRJNA846736 ID: 846736

Prokaryotes

Gulf of Maine single cell genome to phenome

This study links the phenome of individual cells with their genome through the application of indexed FACS sorting and sequencing of individual cells. More...
AccessionPRJNA846736
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsMunson-McGee JH et al., "Decoupling of respiration rates and abundance in marine prokaryoplankton.", Nature, 2022 Dec;612(7941):764-770
Grants
  • "Single Cell Genome-to-Phenome: Integrating Genome and Phenome Analyses of Individual Microbial Cells in Complex Microbiomes" (Grant ID 1826734, National Science FOundation)
SubmissionRegistration date: 7-Jun-2022
Bigelow Laboratory for Ocean Sciences
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)6915
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample7526
Assembly6915
Assembly details:
Assembly levelNumber of Assemblies
6914
6914
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_028223035.1ContigJAOITR000000000SAMN29375842
AM-377-O06
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AH-736-M21
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AH-736-N15
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AH-736-N18
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AH-736-O10
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AH-736-O21
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AH-736-O22
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AH-709-M15
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AH-716-K11
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AH-736-C04
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AH-736-G03
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AH-736-G07
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AH-716-A13
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AH-545-P20
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AH-545-P01
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AH-224-C07
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AH-224-L20
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AH-700-M20
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AH-580-N19
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AH-269-I08
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AH-269-J13
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AH-229-K02
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AH-229-N07
GCA_028415655.1ContigJAONYI000000000SAMN29364963
AH-229-M19
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AH-545-I07
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AH-545-B23
GCA_028373955.1ContigJAONCQ000000000SAMN29367124
AH-545-E21
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AH-545-K05
GCA_028372395.1ContigJAOMYO000000000SAMN29367236
AH-545-L16
GCA_028354515.1ContigJAOMQQ000000000SAMN29366289
AH-273-L07
GCA_028354315.1ContigJAOMQF000000000SAMN29366301
AH-273-L21
GCA_028357055.1ContigJAOMVY000000000SAMN29366140
AH-273-B23
GCA_028356965.1ContigJAOMVQ000000000SAMN29366149
AH-273-C16
GCA_028341435.1ContigJAOLGM000000000SAMN29372702
AH-657-E14
GCA_028345735.1ContigJAOMEB000000000SAMN29371159
AH-558-B17
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AH-226-C06
GCA_028126645.1ContigJAOHZT000000000SAMN29364439
AH-226-E18
GCA_028122775.1ContigJAOHSS000000000SAMN29364640
AH-229-A08
GCA_028109945.1ContigJAOGVF000000000SAMN29373275
AH-700-F08
GCA_028147945.1ContigJAOGEZ000000000SAMN29364141
AH-224-G09
GCA_028152935.1ContigJAOGLK000000000SAMN29363962
AH-141-M21
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AH-736-E03
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AH-736-I18
GCA_028339875.1ContigJAOLDB000000000SAMN29372792
AH-657-K11
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AH-135-E07
GCA_028383265.1ContigJAOEVC000000000SAMN29269791
AH-135-E15
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AH-135-L03
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AH-141-C09
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AH-548-A02
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AH-548-A05
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AH-548-A14
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AH-548-A15
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AH-548-B11
GCA_028272665.1ContigJAOLRO000000000SAMN29367348
AH-548-C07
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AH-548-C04
GCA_028272205.1ContigJAOLSM000000000SAMN29367323
AH-548-A18
GCA_028272065.1ContigJAOLSE000000000SAMN29367332
AH-548-B06
GCA_028272045.1ContigJAOLSF000000000SAMN29367331
AH-548-B05
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AH-548-A21
GCA_028271965.1ContigJAOLRM000000000SAMN29367350
AH-548-C09
GCA_028271885.1ContigJAOLRJ000000000SAMN29367353
AH-548-C15
GCA_028271845.1ContigJAOLRH000000000SAMN29367355
AH-548-C17
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AH-548-C21
GCA_028271765.1ContigJAOLRD000000000SAMN29367359
AH-548-C22
GCA_028342645.1ContigJAOLWU000000000SAMN29371362
AH-578-B14
GCA_028336545.1ContigJAOKUU000000000SAMN29373035
AH-660-J05
GCA_028357335.1ContigJAOMWO000000000SAMN29366124
AH-273-B05
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AH-273-E03
GCA_028348735.1ContigJAOMJN000000000SAMN29371000
AH-551-F10
GCA_028348605.1ContigJAOMJJ000000000SAMN29371005
AH-551-F16
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AH-551-F19
GCA_028348495.1ContigJAOMJG000000000SAMN29371008
AH-551-F20
GCA_028348465.1ContigJAOMJF000000000SAMN29371009
AH-551-G02
GCA_028348295.1ContigJAOMJB000000000SAMN29371013
AH-551-G07
GCA_028348135.1ContigJAOMIT000000000SAMN29371022
AH-551-G22
GCA_028347815.1ContigJAOMID000000000SAMN29371041
AH-551-J11
GCA_028347795.1ContigJAOMIB000000000SAMN29371044
AH-551-J15
GCA_028347775.1ContigJAOMHZ000000000SAMN29371046
AH-551-J17
GCA_028347755.1ContigJAOMIA000000000SAMN29371045
AH-551-J16
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AH-551-I22
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AH-551-K09
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AH-551-K10
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AH-551-L11
GCA_028347355.1ContigJAOMHD000000000SAMN29371072
AH-551-L15
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AH-551-L19
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AH-551-L20
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AH-551-M03
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AH-551-M07
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AH-551-M02
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AH-551-L22
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AH-551-K13
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AH-551-M19
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AH-551-M21
GCA_028347035.1ContigJAOMGO000000000SAMN29371089
AH-551-M20
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AH-551-N02
GCA_028346975.1ContigJAOMGI000000000SAMN29371096
AH-551-N09
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AH-551-M10
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AH-551-N20
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AH-551-O05
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AH-551-O10
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AH-551-P01
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AH-551-O02
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AH-601-A01
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AH-601-A02
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AH-601-A04
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AH-601-A08
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AH-601-A11
GCA_028035715.1ContigJAOFGI000000000SAMN29371966
AH-601-A15
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AH-601-A19
GCA_028035615.1ContigJAOFGF000000000SAMN29371969
AH-601-A18
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AH-601-B16
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AH-601-B17
GCA_028035485.1ContigJAOFFX000000000SAMN29371981
AH-601-B14
GCA_028035345.1ContigJAOFFP000000000SAMN29371990
AH-601-C02
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AH-601-C10
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AH-601-C13
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AH-601-C14
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AH-601-C15
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AH-601-C20
GCA_028035075.1ContigJAOFFD000000000SAMN29372004
AH-601-C21
GCA_028034685.1ContigJAOFEV000000000SAMN29372014
AH-601-D13
GCA_028034525.1ContigJAOFET000000000SAMN29372016
AH-601-D16
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AH-601-E06
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AH-601-E02
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AH-601-E09
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AH-601-E23
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AH-601-F07
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AH-601-F06
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AH-601-F09
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AH-601-G05
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AH-601-M23
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AH-601-N03
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AH-601-N06
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AH-601-N09
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AH-601-O07
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AH-601-O04
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AH-601-O08
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AH-601-O13
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AH-601-O14
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AH-601-O15
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AH-601-O18
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AH-601-P01
GCA_028029585.1ContigJAOEZC000000000SAMN29372193
AH-601-P03
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AH-601-P02
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AH-601-P15
GCA_028029435.1ContigJAOEYQ000000000SAMN29372206
AH-601-P21
GCA_028029495.1ContigJAOEYW000000000SAMN29372200
AH-601-P14
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AH-601-P20
GCA_028104345.1ContigJAOGOK000000000SAMN29373458
AH-704-A04
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AH-704-A08
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AH-704-A20
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AH-229-O10
GCA_028415235.1ContigJAONWH000000000SAMN29365021
AH-229-P21
GCA_028415475.1ContigJAONWZ000000000SAMN29365002
AH-229-O22
GCA_028411415.1ContigJAONNS000000000SAMN29365270
AH-269-N15
GCA_028411325.1ContigJAONNO000000000SAMN29365274
AH-269-N19
GCA_028411235.1ContigJAONNG000000000SAMN29365283
AH-269-O06
GCA_028411255.1ContigJAONNI000000000SAMN29365280
AH-269-O03
GCA_028411095.1ContigJAONNA000000000SAMN29365289
AH-269-O13
GCA_028410815.1ContigJAOOPG000000000SAMN29374506
AH-716-B05
GCA_028410685.1ContigJAOOPA000000000SAMN29374512
AH-716-C03
GCA_028410455.1ContigJAOOOS000000000SAMN29374520
AH-716-C16
SRA Data Details
ParameterValue
Data volume, Gbases133
Data volume, Mbytes50473

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