Vibrio, Escherichia coli, Staphylococcus, Pseudomo... (ID 590891) - BioProject

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Accession: PRJNA590891 ID: 590891

Vibrio, Escherichia coli, Staphylococcus, Pseudomonas, Aeromonas, Enterococcus

CVM NARMS Seafood

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This project is a component of the National Antimicrobial Resistance Monitoring System (NARMS)

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15 additional projects are components of the National Antimicrobial Resistance Monitoring System (NARMS).

Genome sequencing of organisms found in seafood samples

Accession	PRJNA590891
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 21-Nov-2019 National Antimicrobial Resistance Monitoring System

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	115
SRA Experiments	498
Other datasets
BioSample	503
Assembly	115

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

112
112

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_022902595.1	ABFQBH000000000	SAMN27297342	21MO12SH01-V1	Vibrio alginolyticus
GCA_031663435.1	ABMPMT000000000	SAMN36994629	23MO06SH01-V1	Vibrio cholerae
GCA_020972725.1	ABDZZC000000000	SAMN23407473	21MO07SH01-V2	Vibrio cholerae
GCA_024201585.1	ABHACO000000000	SAMN29622007	22MO06SH01-V1	Vibrio cholerae
GCA_015960465.1	AAXMMZ000000000	SAMN14083328	19MO11TI06-V	Vibrio cholerae
GCA_031340795.1	ABMECR000000000	SAMN37317685	23MO08SH01-V1	Vibrio harveyi
GCA_028991615.1	ABKWQK000000000	SAMN16134147	20MO08SH02-V2	Vibrio harveyi
GCA_031663475.1	ABMPMU000000000	SAMN36994628	23MO06SH02-V2	Vibrio metschnikovii
GCA_029379955.1	ABLEKF000000000	SAMN33900911	22MO11SH01-V2	Vibrio metschnikovii
GCA_028990375.1	ABKWPR000000000	SAMN15521775	20MO06SH01-V1	Vibrio metschnikovii
GCA_028990355.1	ABKWPQ000000000	SAMN15521776	20MO06TI01-V2	Vibrio metschnikovii
GCA_028990335.1	ABKWPP000000000	SAMN16676832	20MO09SH02-V2	Vibrio metschnikovii
GCA_028990315.1	ABKWPO000000000	SAMN17078540	20MO11SH02-V2	Vibrio metschnikovii
GCA_028990295.1	ABKWPN000000000	SAMN17833676	21MO01SH01-V1	Vibrio metschnikovii
GCA_028990255.1	ABKWPL000000000	SAMN18106609	21MO02SH02-V1	Vibrio metschnikovii
GCA_028990235.1	ABKWPK000000000	SAMN19918908	21MO03SA02-V1	Vibrio metschnikovii
GCA_028990215.1	ABKWPI000000000	SAMN19918895	21MO04SH02-V1	Vibrio metschnikovii
GCA_028990195.1	ABKWPJ000000000	SAMN19918897	21MO03SH01-V1	Vibrio metschnikovii
GCA_028990175.1	ABKWPH000000000	SAMN19918889	21MO03SH02-V2	Vibrio metschnikovii
GCA_028990135.1	ABKWPF000000000	SAMN19918891	21MO04SH02-V2	Vibrio metschnikovii
GCA_028990155.1	ABKWPG000000000	SAMN19918893	21MO04SH01-V1	Vibrio metschnikovii
GCA_028990085.1	ABKWPC000000000	SAMN23391203	21MO06SH02-V2	Vibrio metschnikovii
GCA_028990075.1	ABKWPD000000000	SAMN23391204	21MO06SH02-V1	Vibrio metschnikovii
GCA_028990045.1	ABKWPB000000000	SAMN23391201	21MO10SH02-V1	Vibrio metschnikovii
GCA_028990005.1	ABKWOZ000000000	SAMN23407502	21MO08SA02-V1	Vibrio metschnikovii
GCA_028990025.1	ABKWPA000000000	SAMN23391202	21MO10SH01-V1	Vibrio metschnikovii
GCA_028989985.1	ABKWOY000000000	SAMN23407503	21MO08SH01-V2	Vibrio metschnikovii
GCA_028989965.1	ABKWOT000000000	SAMN27297341	21MO11SH01-V2	Vibrio metschnikovii
GCA_028989945.1	ABKWOU000000000	SAMN27297346	22MO02SH01-V1	Vibrio metschnikovii
GCA_028989925.1	ABKWOV000000000	SAMN27297339	21MO12SH02-V1	Vibrio metschnikovii
GCA_028989905.1	ABKWOW000000000	SAMN27297340	21MO11SH02-V1	Vibrio metschnikovii
GCA_028989885.1	ABKWOX000000000	SAMN23407551	21MO09SH01-V2	Vibrio metschnikovii
GCA_028989865.1	ABKWOS000000000	SAMN27297344	22MO02SH02-V2	Vibrio metschnikovii
GCA_028989845.1	ABKWOR000000000	SAMN27297345	22MO02SH02-V1	Vibrio metschnikovii
GCA_028989385.1	ABKWNS000000000	SAMN29622006	22MO03SH01-V1	Vibrio metschnikovii
GCA_028989305.1	ABKWNQ000000000	SAMN29622147	22MO05SH01-V2	Vibrio metschnikovii
GCA_028989285.1	ABKWNR000000000	SAMN29622005	22MO04SH02-V2	Vibrio metschnikovii
GCA_028989205.1	ABKWNK000000000	SAMN32519780	22MO09SA01-V1	Vibrio metschnikovii
GCA_028989185.1	ABKWNL000000000	SAMN31151340	22MO07SH02-V1	Vibrio metschnikovii
GCA_028989165.1	ABKWNI000000000	SAMN32519778	22MO11SH02-V1	Vibrio metschnikovii
GCA_028989145.1	ABKWNG000000000	SAMN32519781	22MO10SH01-V2	Vibrio metschnikovii
GCA_028989125.1	ABKWNJ000000000	SAMN32519779	22MO11SH01-V1	Vibrio metschnikovii
GCA_028991595.1	ABKWQN000000000	SAMN14083324	19MO11SH08-V	Vibrio metschnikovii
GCA_028991575.1	ABKWQL000000000	SAMN14083321	19MO11SH06-V1	Vibrio metschnikovii
GCA_028991775.1	ABKWQU000000000	SAMN13481069	19MO10SH06-V1	Vibrio metschnikovii
GCA_028991755.1	ABKWQS000000000	SAMN13481066	19MO10SH07-V2	Vibrio metschnikovii
GCA_028991695.1	ABKWQR000000000	SAMN13909695	19MO12SA01-V	Vibrio metschnikovii
GCA_028991675.1	ABKWQP000000000	SAMN13909692	19MO12TI08-V	Vibrio metschnikovii
GCA_028991655.1	ABKWQQ000000000	SAMN13909689	19MO12SA05-V	Vibrio metschnikovii
GCA_028991635.1	ABKWQO000000000	SAMN13909688	19MO12SH06-V2	Vibrio metschnikovii
GCA_028991815.1	ABKWQW000000000	SAMN13471435	19MO10SH02-V2	Vibrio metschnikovii
GCA_028991535.1	ABKWQM000000000	SAMN14083316	19MO11SH04-V	Vibrio metschnikovii
GCA_028990595.1	ABKWPW000000000	SAMN16133286	20MO07SH02-V2	Vibrio metschnikovii
GCA_028990555.1	ABKWPV000000000	SAMN16134125	20MO08TI01-V2	Vibrio metschnikovii
GCA_028990535.1	ABKWPU000000000	SAMN16676831	20MO09SH01-V2	Vibrio metschnikovii
GCA_035233105.1	ABPSSV000000000	SAMN39281209	23MO12SH02-V1	Vibrio parahaemolyticus
GCA_033305115.1	ABOOFW000000000	SAMN38081860	23MO09SH02-V1	Vibrio parahaemolyticus
GCA_031340835.1	ABMECS000000000	SAMN37317684	23MO08SH02-V1	Vibrio parahaemolyticus
GCA_031154075.1	ABMASI000000000	SAMN34588312	23MO04SH02-V1	Vibrio parahaemolyticus
GCA_031130485.1	ABLZNI000000000	SAMN35714665	23MO05SH02-V2	Vibrio parahaemolyticus
GCA_031130465.1	ABLZNK000000000	SAMN35714668	23MO05SH02-V1	Vibrio parahaemolyticus
GCA_031130445.1	ABLZNJ000000000	SAMN35714666	23MO05SH01-V1	Vibrio parahaemolyticus
GCA_031100115.1	ABLYOD000000000	SAMN36982781	23MO07SH02-V1	Vibrio parahaemolyticus
GCA_031099755.1	ABLYNN000000000	SAMN36994733	23MO06SH02-V1	Vibrio parahaemolyticus
GCA_025566585.1	ABIPXZ000000000	SAMN31151341	22MO07SH01-V1	Vibrio parahaemolyticus
GCA_025566625.1	ABIPYB000000000	SAMN31151342	22MO08SH02-V1	Vibrio parahaemolyticus
GCA_027503205.1	ABJZUG000000000	SAMN32519782	22MO10SH02-V1	Vibrio parahaemolyticus
GCA_027503185.1	ABJZUI000000000	SAMN32519784	22MO09SH02-V1	Vibrio parahaemolyticus
GCA_027503165.1	ABJZUF000000000	SAMN32519783	22MO09SH01-V1	Vibrio parahaemolyticus
GCA_029379935.1	ABLEKG000000000	SAMN33900895	23MO02SH02-V1	Vibrio parahaemolyticus
GCA_029380485.1	ABLELC000000000	SAMN33901027	22MO12SH01-V1	Vibrio parahaemolyticus
GCA_029380865.1	ABLELI000000000	SAMN33901084	23MO01SH02-V1	Vibrio parahaemolyticus
GCA_017977885.1	ABAAPO000000000	SAMN17128247	20MO11SH01-V1	Vibrio parahaemolyticus
GCA_018051045.1	ABACTC000000000	SAMN16134148	20MO08SH02-V1	Vibrio parahaemolyticus
GCA_017078635.1	AAZBBI000000000	SAMN17833675	21MO01SH02-V1	Vibrio parahaemolyticus
GCA_017260635.1	AAZIPF000000000	SAMN18106608	21MO02SH01-V1	Vibrio parahaemolyticus
GCA_019059315.1	ABBAOS000000000	SAMN19918899	21MO03SH02-V1	Vibrio parahaemolyticus
GCA_019059295.1	ABBAOQ000000000	SAMN19918904	21MO05SH02-V1	Vibrio parahaemolyticus
GCA_019058655.1	ABBANK000000000	SAMN19918901	21MO05SH02-V2	Vibrio parahaemolyticus
GCA_024201545.1	ABHACN000000000	SAMN29622003	22MO06SH02-V1	Vibrio parahaemolyticus
GCA_024201605.1	ABHACP000000000	SAMN29622008	22MO05SH01-V1	Vibrio parahaemolyticus
GCA_022902575.1	ABFQBG000000000	SAMN27297343	22MO01SH01-V1	Vibrio parahaemolyticus
GCA_022902415.1	ABFQAZ000000000	SAMN27297347	21MO11SH01-V1	Vibrio parahaemolyticus
GCA_020972685.1	ABDZZE000000000	SAMN23407501	21MO09SH01-V1	Vibrio parahaemolyticus
GCA_020965535.1	ABDZMI000000000	SAMN23412572	21MO08SH01-V1	Vibrio parahaemolyticus
GCA_020961675.1	ABDZFE000000000	SAMN23391200	21MO07SH01-V1	Vibrio parahaemolyticus
GCA_020962915.1	ABDZHN000000000	SAMN23407504	21MO07SH02-V1	Vibrio parahaemolyticus
GCA_020896115.1	ABDWFO000000000	SAMN23284737	21MO06SH01-V1	Vibrio parahaemolyticus
GCA_016728585.1	AAYTXZ000000000	SAMN17379931	20MO12SH02-V1	Vibrio parahaemolyticus
GCA_016728545.1	AAYTYA000000000	SAMN17379932	20MO12SH02-V2	Vibrio parahaemolyticus
GCA_015744865.1	AAXMJI000000000	SAMN16676833	20MO09SH02-V1	Vibrio parahaemolyticus
GCA_015744945.1	AAXMJJ000000000	SAMN16676834	20MO09SH01-V1	Vibrio parahaemolyticus
GCA_015774615.1	AAXMMC000000000	SAMN14643828	20MO02SH02-V1	Vibrio parahaemolyticus
GCA_015780315.1	AAXMQN000000000	SAMN13481063	19MO10SH02-V1	Vibrio parahaemolyticus
GCA_015779445.1	AAXMQJ000000000	SAMN13481061	19MO10SH07-V1	Vibrio parahaemolyticus
GCA_015779425.1	AAXMQM000000000	SAMN13481055	19MO10SH04-V2	Vibrio parahaemolyticus
GCA_015779405.1	AAXMQL000000000	SAMN13481054	19MO10SH04-V1	Vibrio parahaemolyticus
GCA_015745875.1	AAXMKJ000000000	SAMN16133288	20MO07SH01-V1	Vibrio parahaemolyticus
GCA_015745865.1	AAXMKG000000000	SAMN16134149	20MO08SH01-V1	Vibrio parahaemolyticus
GCA_015745805.1	AAXMKH000000000	SAMN16133287	20MO07SH01-V2	Vibrio parahaemolyticus
GCA_015745945.1	AAXMKK000000000	SAMN16133289	20MO07SH02-V1	Vibrio parahaemolyticus
GCA_015960485.1	AAXMNA000000000	SAMN14083313	19MO11SH06-V2	Vibrio parahaemolyticus
GCA_015960725.1	AAXMNO000000000	SAMN13909687	19MO12SH01-V1	Vibrio parahaemolyticus
GCA_015960685.1	AAXMNM000000000	SAMN13909686	19MO12SH02-V	Vibrio parahaemolyticus
GCA_015960665.1	AAXMNK000000000	SAMN13909685	19MO12SH06-V1	Vibrio parahaemolyticus
GCA_015960445.1	AAXMMV000000000	SAMN14083382	20MO01SH01-V1	Vibrio parahaemolyticus
GCA_015960405.1	AAXMMX000000000	SAMN14083307	19MO11SH01-V	Vibrio parahaemolyticus
GCA_015960425.1	AAXMMY000000000	SAMN14083310	19MO11SH03-V2	Vibrio parahaemolyticus
GCA_015960385.1	AAXMMW000000000	SAMN14083387	20MO01SH02-V1	Vibrio parahaemolyticus
GCA_016147415.1	AAXXVD000000000	SAMN17078541	20MO11SH02-V1	Vibrio parahaemolyticus
GCA_016146875.1	AAXXUZ000000000	SAMN17078542	20MO11SH01-V2	Vibrio parahaemolyticus
GCA_016216265.1	AAYANE000000000	SAMN13481057	19MO10SH05-V1	Vibrio parahaemolyticus

SRA Data Details

Parameter	Value
Data volume, Gbases	53
Data volume, Mbytes	28223

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Vibrio, Escherichia coli, Staphylococcus, Pseudomonas, Aeromonas, Enterococcus

CVM NARMS Seafood

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