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Accession: PRJNA1042791 ID: 1042791

Metagenomic sequencing of microbial communities originating from the deep-sea brines, Palmahim Disturbance, Southeastern Mediterranean Sea

Using metagenomics, we investigated the dense microbial communities that occupy small deep-sea brine pools found in the Southeastern Mediterranean Sea. More...
AccessionPRJNA1042791
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "How do interactions and metabolic handoffs drive the functionality of microbial communities associated with the discharge of hydrocarbon-rich brines in the deep sea?" (Grant ID 1359/23, Israeli Science Foundation)
  • "Functional repertoire of hydrocarbon seep microbiota in the warm oligotrophic southeastern Mediterranean Sea: molecular basis for adaptation" (Grant ID 913/19, Israeli Science Foundation)
SubmissionRegistration date: 19-Nov-2023
Israel Oceanographic and Limnological Research
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)266
SRA Experiments10
Other datasets
BioSample276
Assembly266
Assembly details:
Assembly levelNumber of Assemblies
260
6
266
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_034660295.1ScaffoldJAYEIV000000000SAMN38319582
MAG182
GCA_034722075.1ScaffoldJAYENJ000000000SAMN38319464
MAG058
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MAG176
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MAG168
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MAG188
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MAG194
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MAG017
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MAG234
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MAG082
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MAG004
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MAG018
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MAG087
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MAG005
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MAG020
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MAG086
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MAG099
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MAG227
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MAG219
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MAG193
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MAG180
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MAG152
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MAG100
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MAG075
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MAG096
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MAG065
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MAG045
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MAG048
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MAG093
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MAG006
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MAG156
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MAG154
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MAG184
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MAG122
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MAG121
GCA_034716815.1ScaffoldJAYEKU000000000SAMN38319531
MAG129
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MAG039
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MAG189
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MAG195
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MAG196
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MAG199
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MAG215
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MAG216
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MAG232
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MAG235
GCA_034659235.1ScaffoldJAYEGV000000000SAMN38319634
MAG236
GCA_034659035.1ScaffoldJAYEGI000000000SAMN38319647
MAG250
GCA_034658995.1ScaffoldJAYEGG000000000SAMN38319649
MAG252
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MAG172
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MAG275
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MAG266
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MAG044
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MAG257
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MAG254
GCA_034659435.1ScaffoldJAYEHJ000000000SAMN38319620
MAG221
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MAG138
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MAG160
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MAG124
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MAG142
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MAG272
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MAG207
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MAG077
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MAG078
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MAG186
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MAG241
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MAG230
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MAG166
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MAG183
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MAG263
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MAG262
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MAG258
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MAG278
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MAG015
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MAG009
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MAG027
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MAG022
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MAG031
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MAG041
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MAG051
GCA_034721875.1ScaffoldJAYENA000000000SAMN38319473
MAG067
GCA_034721935.1ScaffoldJAYENE000000000SAMN38319469
MAG063
GCA_034716155.1ScaffoldJAYEFR000000000SAMN38319664
MAG267
GCA_034716635.1ScaffoldJAYEKI000000000SAMN38319543
MAG141
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MAG125
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MAG089
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MAG069
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MAG071
GCA_034660435.1ScaffoldJAYEJG000000000SAMN38319571
MAG170
GCA_034660695.1ScaffoldJAYEJS000000000SAMN38319559
MAG157
GCA_034722735.1ScaffoldJAYEOG000000000SAMN38319441
MAG035
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MAG002
GCA_034660895.1ScaffoldJAYEKF000000000SAMN38319546
MAG144
GCA_034660055.1ScaffoldJAYEIL000000000SAMN38319592
MAG192
GCA_034659095.1ScaffoldJAYEGQ000000000SAMN38319639
MAG242
GCA_034660555.1ScaffoldJAYEJL000000000SAMN38319566
MAG164
GCA_034660375.1ScaffoldJAYEIY000000000SAMN38319579
MAG179
GCA_034660855.1ScaffoldJAYEJZ000000000SAMN38319552
MAG150
GCA_034717595.1ScaffoldJAYELN000000000SAMN38319512
MAG106
GCA_034716135.1ScaffoldJAYEFJ000000000SAMN38319672
MAG276
GCA_034660235.1ScaffoldJAYEIW000000000SAMN38319581
MAG181
GCA_034717795.1ScaffoldJAYELY000000000SAMN38319501
MAG095
GCA_034722095.1ScaffoldJAYENM000000000SAMN38319461
MAG055
GCA_034658955.1ContigJAYEGF000000000SAMN38319650
MAG253
SRA Data Details
ParameterValue
Data volume, Gbases299
Data volume, Mbytes97200

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