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Accession: PRJNA855145 ID: 855145

Antarctic lake sediments and soils

Coastal Antarctica metagenomes

Investigating the microbial community structures in coastal Antarctica
AccessionPRJNA855145
Data TypeGenome sequencing
ScopeEnvironment
Organismsediment metagenome[Taxonomy ID: 749907]
unclassified sequences; metagenomes; ecological metagenomes; sediment metagenome
PublicationsHan P et al., "Unveiling unique microbial nitrogen cycling and nitrification driver in coastal Antarctica.", Nat Commun, 2024 Apr 12;15(1):3143
SubmissionRegistration date: 3-Jul-2022
East China Normal University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)1968
SRA Experiments40
Publications
PubMed1
PMC1
Other datasets
BioSample1982
Assembly1968
Assembly details:
Assembly levelNumber of Assemblies
1968
1968
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_038243155.1ContigJBBSRI000000000SAMN40201721
SVL1_sbin.32
GCA_038236315.1ContigJBBSTA000000000SAMN40201917
SVL2_sbin.1
GCA_038236075.1ContigJBBSTH000000000SAMN40201924
SVL2_sbin.16
GCA_038235485.1ContigJBBSTX000000000SAMN40201940
SVL2_sbin.31
GCA_038249175.1ContigJBBRWP000000000SAMN40200714
La4_metabat2.014
GCA_038249305.1ContigJBBRWI000000000SAMN40200707
La4_concoct.162
GCA_038331165.1ContigJBBQOT000000000SAMN40019663
Co_metawrap_166
GCA_038323655.1ContigJBBQHE000000000SAMN40019860
Co_metawrap_920
GCA_038323395.1ContigJBBQGW000000000SAMN40019868
Co_metawrap_938
GCA_038322305.1ContigJBBQFT000000000SAMN40019897
Co_metawrap_1010
GCA_038231995.1ContigJBBSIT000000000SAMN40201119
LS3_sbin.48
GCA_038230795.1ContigJBBRMN000000000SAMN40029974
La1_metabat2.048
GCA_038229175.1ContigJBBROR000000000SAMN40030030
La1_metabat2.325
GCA_038229135.1ContigJBBROS000000000SAMN40030031
La1_metabat2.327
GCA_038220525.1ContigJBBRIU000000000SAMN40020846
Co_metawrap_2813
GCA_038256375.1ContigJBBSKL000000000SAMN40201364
LS4_metabat2.337
GCA_038250135.1ContigJBBSCP000000000SAMN40200915
metawrap_la6_28
GCA_038247025.1ContigJBBRVI000000000SAMN40200586
La3_metabat2.137
GCA_038199465.1ContigJBBPYZ000000000SAMN40017526
bin.234
GCA_038276355.1ContigJBBPZU000000000SAMN40017547
bin.77
GCA_038276195.1ContigJBBPZP000000000SAMN40017542
bin.53
GCA_038259945.1ContigJBBSOH000000000SAMN40201495
LS6_sbin.24
GCA_038259085.1ContigJBBSPD000000000SAMN40201517
LS6_sbin.47
GCA_038257925.1ContigJBBSQK000000000SAMN40201550
LS6_sbin.86
GCA_038256755.1ContigJBBSKA000000000SAMN40201353
LS4_metabat2.197
GCA_038256565.1ContigJBBSKG000000000SAMN40201359
LS4_metabat2.269
GCA_038245795.1ContigJBBRSC000000000SAMN40200495
La2_metabat2.005
GCA_038255915.1ContigJBBSKY000000000SAMN40201377
metawrap_LS4_35
GCA_038255685.1ContigJBBSLC000000000SAMN40201381
metawrap_LS4_40
GCA_038255425.1ContigJBBSLH000000000SAMN40201386
metawrap_LS4_58
GCA_038255335.1ContigJBBSLK000000000SAMN40201389
metawrap_LS4_63
GCA_038255145.1ContigJBBSLP000000000SAMN40201394
metawrap_LS4_71
GCA_038253965.1ContigJBBSGQ000000000SAMN40201063
LS2_sbin.43
GCA_038253645.1ContigJBBSGY000000000SAMN40201071
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GCA_038253125.1ContigJBBSHM000000000SAMN40201085
LS2_sbin.68
GCA_038243225.1ContigJBBSRH000000000SAMN40201720
SVL1_sbin.31
GCA_038241315.1ContigJBBRFU000000000SAMN40020768
Co_metawrap_2589
GCA_038244535.1ContigJBBRTJ000000000SAMN40200528
La2_metabat2.205
GCA_038238185.1ContigJBBRXY000000000SAMN40200787
La5_maxbin2.246
GCA_038222015.1ContigJBBRIA000000000SAMN40020826
Co_metawrap_2751
GCA_038220145.1ContigJBBRJA000000000SAMN40020852
Co_metawrap_2839
GCA_038227995.1ContigJBBRPP000000000SAMN40030054
La1_metabat2.448
GCA_038231955.1ContigJBBSIS000000000SAMN40201118
LS3_sbin.47
GCA_038231795.1ContigJBBRKR000000000SAMN40029926
La1_concoct.050
GCA_038234785.1ContigJBBQTC000000000SAMN40020397
Co_metawrap_1803
GCA_038235735.1ContigJBBSTO000000000SAMN40201931
SVL2_sbin.22
GCA_038235385.1ContigJBBSTY000000000SAMN40201941
SVL2_sbin.32
GCA_038233555.1ContigJBBSLT000000000SAMN40201411
LS5_sbin.1
GCA_038233335.1ContigJBBSME000000000SAMN40201422
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GCA_038233075.1ContigJBBSMQ000000000SAMN40201434
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GCA_038232795.1ContigJBBSNF000000000SAMN40201449
LS5_sbin.50
GCA_038232535.1ContigJBBSHQ000000000SAMN40201090
LS3_sbin.10
GCA_038232515.1ContigJBBSHS000000000SAMN40201092
LS3_sbin.12
GCA_038232475.1ContigJBBSHR000000000SAMN40201091
LS3_sbin.11
GCA_038232455.1ContigJBBSHU000000000SAMN40201094
LS3_sbin.15
GCA_038216345.1ContigJBBQQE000000000SAMN40020321
Co_metawrap_1561
GCA_038214685.1ContigJBBQRO000000000SAMN40020357
Co_metawrap_1687
GCA_038213195.1ContigJBBQTN000000000SAMN40020408
Co_metawrap_1839
GCA_038212405.1ContigJBBQUN000000000SAMN40020434
Co_metawrap_1930
GCA_038210925.1ContigJBBQWC000000000SAMN40020475
Co_metawrap_2040
GCA_038210245.1ContigJBBQWW000000000SAMN40020495
Co_metawrap_2080
GCA_038206295.1ContigJBBRAZ000000000SAMN40020602
Co_metawrap_2319
GCA_038203735.1ContigJBBRDS000000000SAMN40020673
Co_metawrap_2465
GCA_038203385.1ContigJBBREA000000000SAMN40020681
Co_metawrap_2480
GCA_038323435.1ContigJBBQGY000000000SAMN40019866
Co_metawrap_933
GCA_038321235.1ContigJBBQEU000000000SAMN40019922
Co_metawrap_1077
GCA_038320935.1ContigJBBQEQ000000000SAMN40019926
Co_metawrap_1096
GCA_038323795.1ContigJBBQHH000000000SAMN40019857
Co_metawrap_917
GCA_038324235.1ContigJBBQHT000000000SAMN40019845
Co_metawrap_885
GCA_038320675.1ContigJBBQEK000000000SAMN40019932
Co_metawrap_1107
GCA_038331475.1ContigJBBQPC000000000SAMN40019654
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GCA_038249515.1ContigJBBSDL000000000SAMN40200937
metawrap_la6_93
GCA_038328705.1ContigJBBQMG000000000SAMN40019728
Co_metawrap_436
GCA_038327485.1ContigJBBQLA000000000SAMN40019760
Co_metawrap_532
GCA_038328825.1ContigJBBQMI000000000SAMN40019726
Co_metawrap_431
GCA_038317895.1ContigJBBQBJ000000000SAMN40020011
Co_metawrap_1371
GCA_038316365.1ContigJBBQAP000000000SAMN40020031
Co_metawrap_1455
GCA_038320885.1ContigJBBQER000000000SAMN40019925
Co_metawrap_1095
GCA_038321755.1ContigJBBQFJ000000000SAMN40019907
Co_metawrap_1035
GCA_038323195.1ContigJBBQGQ000000000SAMN40019874
Co_metawrap_954
GCA_038202885.1ContigJBBREP000000000SAMN40020696
Co_metawrap_2507
GCA_038209455.1ContigJBBQXR000000000SAMN40020516
Co_metawrap_2124
GCA_038209365.1ContigJBBQXS000000000SAMN40020517
Co_metawrap_2126
GCA_038208525.1ContigJBBQYQ000000000SAMN40020541
Co_metawrap_2171
GCA_038208305.1ContigJBBQYW000000000SAMN40020547
Co_metawrap_2182
GCA_038213435.1ContigJBBQTI000000000SAMN40020403
Co_metawrap_1816
GCA_038228615.1ContigJBBRPC000000000SAMN40030041
La1_metabat2.393
GCA_038222385.1ContigJBBRHS000000000SAMN40020818
Co_metawrap_2730
GCA_038239145.1ContigJBBSFB000000000SAMN40200990
LS1_sbin.76
GCA_038238245.1ContigJBBRXX000000000SAMN40200786
La5_maxbin2.189
GCA_038236695.1ContigJBBRZM000000000SAMN40200827
metawrap_la5_47
GCA_038240075.1ContigJBBSEC000000000SAMN40200965
LS1_sbin.32
GCA_038252255.1ContigJBBSAM000000000SAMN40200860
La6_maxbin2.368
GCA_038250905.1ContigJBBSBV000000000SAMN40200895
La6_metabat2.202
GCA_038327245.1ContigJBBQKV000000000SAMN40019765
Co_metawrap_566
GCA_038223205.1ContigJBBRHD000000000SAMN40020803
Co_metawrap_2686
GCA_038224055.1ContigJBBRGO000000000SAMN40020788
Co_metawrap_2632
GCA_038223605.1ContigJBBRGX000000000SAMN40020797
Co_metawrap_2667
GCA_038221915.1ContigJBBRHY000000000SAMN40020824
Co_metawrap_2743
GCA_038220965.1ContigJBBRIL000000000SAMN40020837
Co_metawrap_2786
GCA_038232615.1ContigJBBSNO000000000SAMN40201458
LS5_sbin.7
GCA_038232855.1ContigJBBSNC000000000SAMN40201446
LS5_sbin.48
GCA_038233625.1ContigJBBSVK000000000SAMN40201979
SVL2_sbin.70
GCA_038233875.1ContigJBBSVB000000000SAMN40201970
SVL2_sbin.62
GCA_038235595.1ContigJBBSTU000000000SAMN40201937
SVL2_sbin.29
GCA_038236365.1ContigJBBRZV000000000SAMN40200836
metawrap_la5_9
GCA_038236535.1ContigJBBRZQ000000000SAMN40200831
metawrap_la5_58
GCA_038231915.1ContigJBBSIV000000000SAMN40201121
LS3_sbin.7
GCA_038231735.1ContigJBBRKU000000000SAMN40029929
La1_concoct.087
GCA_038230235.1ContigJBBRNQ000000000SAMN40030003
La1_metabat2.181
GCA_038213835.1ContigJBBQSN000000000SAMN40020382
Co_metawrap_1752
GCA_038214175.1ContigJBBQSC000000000SAMN40020371
Co_metawrap_1724
GCA_038215875.1ContigJBBQQM000000000SAMN40020329
Co_metawrap_1580
GCA_038216305.1ContigJBBQQF000000000SAMN40020322
Co_metawrap_1564
GCA_038208655.1ContigJBBQYN000000000SAMN40020538
Co_metawrap_2163
GCA_038210185.1ContigJBBQWX000000000SAMN40020496
Co_metawrap_2083
GCA_038210875.1ContigJBBQWF000000000SAMN40020478
Co_metawrap_2043
GCA_038212865.1ContigJBBQUB000000000SAMN40020422
Co_metawrap_1879
GCA_038199985.1ContigJBBPYK000000000SAMN40017511
bin.146
GCA_038203515.1ContigJBBRDX000000000SAMN40020678
Co_metawrap_2477
GCA_038205545.1ContigJBBRBV000000000SAMN40020624
Co_metawrap_2363
GCA_038204895.1ContigJBBRCL000000000SAMN40020640
Co_metawrap_2401
GCA_038206105.1ContigJBBRBF000000000SAMN40020608
Co_metawrap_2331
GCA_038207805.1ContigJBBQZJ000000000SAMN40020560
Co_metawrap_2215
GCA_038256655.1ContigJBBSKD000000000SAMN40201356
LS4_metabat2.236
GCA_038257865.1ContigJBBSQM000000000SAMN40201552
LS6_sbin.89
GCA_038258215.1ContigJBBSQC000000000SAMN40201542
LS6_sbin.75
GCA_038258285.1ContigJBBSQA000000000SAMN40201540
LS6_sbin.72
GCA_038258055.1ContigJBBSQH000000000SAMN40201547
LS6_sbin.81
GCA_038252305.1ContigJBBSAL000000000SAMN40200859
La6_maxbin2.367
GCA_038252505.1ContigJBBSAI000000000SAMN40200856
La6_maxbin2.178
GCA_038251725.1ContigJBBSBA000000000SAMN40200874
La6_metabat2.067
GCA_038256095.1ContigJBBSKS000000000SAMN40201371
metawrap_LS4_21
GCA_038237075.1ContigJBBRZC000000000SAMN40200817
metawrap_la5_2
GCA_038243775.1ContigJBBSQT000000000SAMN40201706
SVL1_sbin.16
GCA_038243605.1ContigJBBSQX000000000SAMN40201710
SVL1_sbin.20
GCA_038243415.1ContigJBBSRD000000000SAMN40201716
SVL1_sbin.28
GCA_038242035.1ContigJBBSSN000000000SAMN40201752
SVL1_sbin.69
GCA_038241915.1ContigJBBSSQ000000000SAMN40201755
SVL1_sbin.71
GCA_038241675.1ContigJBBSSW000000000SAMN40201761
SVL1_sbin.78
GCA_038243055.1ContigJBBSRM000000000SAMN40201725
SVL1_sbin.36
GCA_038242825.1ContigJBBSRU000000000SAMN40201733
SVL1_sbin.46
GCA_038242585.1ContigJBBSSA000000000SAMN40201739
SVL1_sbin.52
GCA_038242155.1ContigJBBSSM000000000SAMN40201751
SVL1_sbin.68
GCA_038315925.1ContigJBBQAF000000000SAMN40020041
Co_metawrap_1487
GCA_038319305.1ContigJBBQDC000000000SAMN40019966
Co_metawrap_1198
GCA_038322575.1ContigJBBQGB000000000SAMN40019889
Co_metawrap_989
GCA_038326585.1ContigJBBQKE000000000SAMN40019782
Co_metawrap_640
GCA_038327835.1ContigJBBQLK000000000SAMN40019750
Co_metawrap_496
GCA_038327745.1ContigJBBQLJ000000000SAMN40019751
Co_metawrap_500
GCA_038328225.1ContigJBBQLV000000000SAMN40019739
Co_metawrap_474
GCA_038328635.1ContigJBBQMF000000000SAMN40019729
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Co_metawrap_469
GCA_038329275.1ContigJBBQMU000000000SAMN40019714
Co_metawrap_376
GCA_038330415.1ContigJBBQNZ000000000SAMN40019683
Co_metawrap_252
GCA_038330045.1ContigJBBQNO000000000SAMN40019694
Co_metawrap_278
GCA_038249115.1ContigJBBRWQ000000000SAMN40200715
La4_metabat2.030
GCA_038249215.1ContigJBBRWL000000000SAMN40200710
La4_maxbin2.023
GCA_038331595.1ContigJBBQPF000000000SAMN40019651
Co_metawrap_110
GCA_038249035.1ContigJBBRWT000000000SAMN40200718
La4_metabat2.074
GCA_038248935.1ContigJBBRWX000000000SAMN40200722
La4_metabat2.113
GCA_038199615.1ContigJBBPYU000000000SAMN40017521
bin.214
GCA_038199265.1ContigJBBPZD000000000SAMN40017530
bin.29
GCA_038199275.1ContigJBBPZC000000000SAMN40017529
bin.28
GCA_038198845.1ContigJBBPZI000000000SAMN40017535
bin.38
GCA_038249685.1ContigJBBSDE000000000SAMN40200930
metawrap_la6_7
GCA_038322045.1ContigJBBQFP000000000SAMN40019901
Co_metawrap_1023
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Co_metawrap_1291
GCA_038252405.1ContigJBBSAJ000000000SAMN40200857
La6_maxbin2.348
GCA_038246575.1ContigJBBRVU000000000SAMN40200598
La3_metabat2.225
GCA_038246545.1ContigJBBRVW000000000SAMN40200600
La3_metabat2.260
GCA_038210415.1ContigJBBQWS000000000SAMN40020491
Co_metawrap_2071
GCA_038218955.1ContigJBBRJT000000000SAMN40020871
Co_metawrap_2894
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Co_metawrap_2689
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Co_metawrap_2728
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Co_metawrap_2659
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LS2_sbin.26
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La2_metabat2.206
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Co_metawrap_996
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La4_maxbin2.307
GCA_038331155.1ContigJBBQOU000000000SAMN40019662
Co_metawrap_165
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Co_metawrap_396
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La4_concoct.174
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Co_metawrap_890
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Co_metawrap_1053
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Co_metawrap_965
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Co_metawrap_801
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Co_metawrap_2271
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metawrap_la6_55
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metawrap_LS4_16
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LS6_sbin.44
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SVL2_sbin.3
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metawrap_la1_82
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LS2_sbin.2
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metawrap_LS4_50
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LS6_sbin.29
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LS6_sbin.79
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LS6_sbin.6
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LS4_metabat2.002
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metawrap_LS4_31
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metawrap_la1_109
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bin.10
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SVL2_sbin.10
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Co_metawrap_2109
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Co_metawrap_2144
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Co_metawrap_1380
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SVL1_sbin.24
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LS5_sbin.41
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Co_metawrap_2724
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LS5_sbin.29
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Co_metawrap_631
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Co_metawrap_571
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Co_metawrap_269
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Co_metawrap_1381
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Co_metawrap_1297
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Co_metawrap_916
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Co_metawrap_1074
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LS1_sbin.29
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La3_maxbin2.413
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La3_metabat2.098
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LS2_sbin.36
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LS2_sbin.19
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metawrap_LS4_59
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LS2_sbin.10
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LS4_metabat2.063
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LS4_metabat2.211
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LS6_sbin.80
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LS6_sbin.78
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bin.52
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GCA_038239725.1ContigJBBSEM000000000SAMN40200975
LS1_sbin.46
GCA_038244445.1ContigJBBRTL000000000SAMN40200530
La2_metabat2.211
GCA_038231515.1ContigJBBRLF000000000SAMN40029940
La1_concoct.242
SRA Data Details
ParameterValue
Data volume, Gbases454
Data volume, Tbytes0.15

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