marine metagenome (ID 1072319) - BioProject

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Accession: PRJNA1072319 ID: 1072319

marine metagenome

Animal burrowing at cold seep ecotones boosts productivity by linking macromolecule turnover with chemosynthesis and nutrient cycling

We sequenced DNA extracted from the walls of Calliax lobata blind shrimp burrows at chemotone of a hydrocarbon seep in the Eastern Mediterranean Sea.

Accession	PRJNA1072319
Data Type	Genome sequencing
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Grants	"How do interactions and metabolic handoffs drive the functionality of microbial communities associated with the discharge of hydrocarbon-rich brines in the deep sea?" (Grant ID 1359/23, Israeli Science Foundation) "Functional repertoire of hydrocarbon seep microbiota in the warm oligotrophic southeastern Mediterranean Sea: molecular basis for adaptation" (Grant ID 913/19, Israeli Science Foundation) "Microbial indicators for marine biomonitoring: the link between environment, diversity and function in the southeastern Mediterranean seafloor sediments" (Grant ID 1126, Israel Ministry of Science and Technology)
Submission	Registration date: 2-Feb-2024 Israel Oceanographic and Limnological Research
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	58
SRA Experiments	2
Other datasets
BioSample	60
Assembly	58

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

58
58

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_039714865.1	JBDLIO000000000	SAMN41279736	MAG033	Acidobacteriota bacterium
GCA_039714475.1	JBDLJG000000000	SAMN41279754	MAG082	Acidobacteriota bacterium
GCA_039714255.1	JBDLJQ000000000	SAMN41279764	MAG103	Acidobacteriota bacterium
GCA_039715165.1	JBDLHX000000000	SAMN41279719	MAG003	Actinomycetota bacterium
GCA_039714815.1	JBDLIR000000000	SAMN41279739	MAG044	Actinomycetota bacterium
GCA_039714375.1	JBDLJK000000000	SAMN41279758	MAG090	Actinomycetota bacterium
GCA_039714175.1	JBDLJV000000000	SAMN41279769	MAG111	Actinomycetota bacterium
GCA_039714315.1	JBDLJM000000000	SAMN41279760	MAG097	Bacteroidota bacterium
GCA_039714235.1	JBDLJS000000000	SAMN41279766	MAG106	Bacteroidota bacterium
GCA_039714415.1	JBDLJL000000000	SAMN41279759	MAG096	Bacteroidota bacterium
GCA_039714775.1	JBDLIQ000000000	SAMN41279738	MAG042	Bacteroidota bacterium
GCA_039714835.1	JBDLIN000000000	SAMN41279735	MAG032	Bacteroidota bacterium
GCA_039714655.1	JBDLIX000000000	SAMN41279745	MAG062	Bacteroidota bacterium
GCA_039714715.1	JBDLIU000000000	SAMN41279742	MAG054	Bacteroidota bacterium
GCA_039714555.1	JBDLJB000000000	SAMN41279749	MAG069	Bacteroidota bacterium
GCA_039715085.1	JBDLIB000000000	SAMN41279723	MAG010	Bacteroidota bacterium
GCA_039714935.1	JBDLIJ000000000	SAMN41279731	MAG023	Bacteroidota bacterium
GCA_039714915.1	JBDLIM000000000	SAMN41279734	MAG031	Bacteroidota bacterium
GCA_039715155.1	JBDLHW000000000	SAMN41279718	MAG002	Campylobacterota bacterium
GCA_039714575.1	JBDLJE000000000	SAMN41279752	MAG080	Campylobacterota bacterium
GCA_039714295.1	JBDLJP000000000	SAMN41279763	MAG102	Candidatus Fermentibacteria bacterium
GCA_039714075.1	JBDLKA000000000	SAMN41279774	MAG120	Candidatus Krumholzibacteriota bacterium
GCA_039714055.1	JBDLKB000000000	SAMN41279775	MAG121	Chloroflexota bacterium
GCA_039714275.1	JBDLJO000000000	SAMN41279762	MAG099	Chloroflexota bacterium
GCA_039714215.1	JBDLJU000000000	SAMN41279768	MAG109	Chloroflexota bacterium
GCA_039714435.1	JBDLJJ000000000	SAMN41279757	MAG089	Gemmatimonadota bacterium
GCA_039715185.1	JBDLIA000000000	SAMN41279722	MAG009	Gemmatimonadota bacterium
GCA_039714895.1	JBDLIK000000000	SAMN41279732	MAG027	Myxococcota bacterium
GCA_039714755.1	JBDLIS000000000	SAMN41279740	MAG045	Myxococcota bacterium
GCA_039714095.1	JBDLJZ000000000	SAMN41279773	MAG119	Nanoarchaeota archaeon
GCA_039715075.1	JBDLIC000000000	SAMN41279724	MAG011	Nitrospirota bacterium
GCA_039715105.1	JBDLHY000000000	SAMN41279720	MAG005	Patescibacteria group bacterium
GCA_039714855.1	JBDLIL000000000	SAMN41279733	MAG029	Patescibacteria group bacterium
GCA_039714635.1	JBDLIY000000000	SAMN41279746	MAG063	Planctomycetota bacterium
GCA_039714335.1	JBDLJN000000000	SAMN41279761	MAG098	Planctomycetota bacterium
GCA_039714115.1	JBDLJY000000000	SAMN41279772	MAG115	Pseudomonadota bacterium
GCA_039714155.1	JBDLJX000000000	SAMN41279771	MAG113	Pseudomonadota bacterium
GCA_039714615.1	JBDLIZ000000000	SAMN41279747	MAG064	Pseudomonadota bacterium
GCA_039714795.1	JBDLIP000000000	SAMN41279737	MAG039	Pseudomonadota bacterium
GCA_039714735.1	JBDLIT000000000	SAMN41279741	MAG046	Pseudomonadota bacterium
GCA_039715035.1	JBDLIG000000000	SAMN41279728	MAG019	Pseudomonadota bacterium
GCA_039714995.1	JBDLII000000000	SAMN41279730	MAG022	Pseudomonadota bacterium
GCA_039714975.1	JBDLIH000000000	SAMN41279729	MAG020	Pseudomonadota bacterium
GCA_039714955.1	JBDLIF000000000	SAMN41279727	MAG016	Pseudomonadota bacterium
GCA_039714395.1	JBDLJH000000000	SAMN41279755	MAG083	Pseudomonadota bacterium
GCA_039714515.1	JBDLJF000000000	SAMN41279753	MAG081	Pseudomonadota bacterium
GCA_039714355.1	JBDLJR000000000	SAMN41279765	MAG105	Pseudomonadota bacterium
GCA_039714195.1	JBDLJT000000000	SAMN41279767	MAG107	Thermodesulfobacteriota bacterium
GCA_039714495.1	JBDLJD000000000	SAMN41279751	MAG075	Thermodesulfobacteriota bacterium
GCA_039714455.1	JBDLJI000000000	SAMN41279756	MAG088	Thermodesulfobacteriota bacterium
GCA_039715015.1	JBDLIE000000000	SAMN41279726	MAG014	Thermodesulfobacteriota bacterium
GCA_039715055.1	JBDLID000000000	SAMN41279725	MAG013	Thermodesulfobacteriota bacterium
GCA_039714595.1	JBDLJA000000000	SAMN41279748	MAG067	Thermodesulfobacteriota bacterium
GCA_039714535.1	JBDLJC000000000	SAMN41279750	MAG073	Thermodesulfobacteriota bacterium
GCA_039714695.1	JBDLIW000000000	SAMN41279744	MAG058	Thermodesulfobacteriota bacterium
GCA_039714675.1	JBDLIV000000000	SAMN41279743	MAG055	Thermodesulfobacteriota bacterium
GCA_039715135.1	JBDLHZ000000000	SAMN41279721	MAG007	Verrucomicrobiota bacterium
GCA_039714135.1	JBDLJW000000000	SAMN41279770	MAG112	Verrucomicrobiota bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	50
Data volume, Mbytes	20503

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marine metagenome

Animal burrowing at cold seep ecotones boosts productivity by linking macromolecule turnover with chemosynthesis and nutrient cycling

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