ID 1081682 - BioProject

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Accession: PRJNA1081682 ID: 1081682

Shotgun metagenomics analysis of microbial consotia with PS,PE, and PET biodegradation properties

Shotgun meta-genomics of plastics(PET, PE, and PS) degrading microorganisms from landfill soil, sea water, and cow dung

Accession	PRJNA1081682
Data Type	Genome sequencing
Scope	Multispecies
Submission	Registration date: 28-Feb-2024 University of South Africa
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	46
SRA Experiments	9
Other datasets
BioSample	278
Assembly	46

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

44
2
46

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_040255965.1	JBDZVY000000000	SAMN41489593	PE_soil6	Actinomycetales bacterium
GCA_040255675.1	JBDZVM000000000	SAMN41489605	PE_dung18	Actinomycetales bacterium
GCA_040255725.1	JBDZVK000000000	SAMN41489607	PE_dung20	Actinomycetota bacterium
GCA_040255345.1	JBDZUV000000000	SAMN41489622	PE_seawater35	Actinomycetota bacterium
GCA_040255155.1	JBDZUL000000000	SAMN41489632	PE_seawater45	Alcanivorax sp.
GCA_040255885.1	JBDZVW000000000	SAMN41489595	PE_soil8	Betaproteobacteria bacterium
GCA_040255265.1	JBDZUQ000000000	SAMN41489627	PE_seawater40	Chitinophagaceae bacterium
GCA_040255585.1	JBDZVI000000000	SAMN41489609	PE_dung22	Deinococcaceae bacterium
GCA_040255665.1	JBDZVL000000000	SAMN41489606	PE_dung19	Deinococcaceae bacterium
GCA_040256005.1	JBDZWC000000000	SAMN41489589	PE_soil2	Deinococcaceae bacterium
GCA_040255325.1	JBDZUS000000000	SAMN41489625	PE_seawater38	Gammaproteobacteria bacterium
GCA_040255365.1	JBDZUY000000000	SAMN41489619	PE_seawater32	Hyphomicrobiales bacterium
GCA_040255145.1	JBDZUN000000000	SAMN41489630	PE_seawater43	Hyphomicrobiales bacterium
GCA_040255825.1	JBDZVS000000000	SAMN41489599	PE_dung12	Hyphomicrobiales bacterium
GCA_040255805.1	JBDZVQ000000000	SAMN41489601	PE_dung14	Hyphomicrobiales bacterium
GCA_040255305.1	JBDZUT000000000	SAMN41489624	PE_seawater37	Hyphomicrobium sp.
GCA_040255375.1	JBDZUW000000000	SAMN41489621	PE_seawater34	Luteimonas sp.
GCA_040255405.1	JBDZUX000000000	SAMN41489620	PE_seawater33	Lysobacteraceae bacterium
GCA_040255835.1	JBDZVT000000000	SAMN41489598	PE_dung11	Lysobacteraceae bacterium
GCA_040255535.1	JBDZVE000000000	SAMN41489613	PE_dung26	Lysobacterales bacterium
GCA_040255525.1	JBDZVD000000000	SAMN41489614	PE_dung27	Micromonosporaceae bacterium
GCA_040255895.1	JBDZVV000000000	SAMN41489596	PE_soil9	Myxococcales bacterium
GCA_040256045.1	JBDZWD000000000	SAMN41489588	PE_soil1	Nitrosomonas sp.
GCA_040255635.1	JBDZVJ000000000	SAMN41489608	PE_dung21	Nitrosomonas sp.
GCA_040255245.1	JBDZUP000000000	SAMN41489628	PE_seawater41	Nitrosopumilales archaeon
GCA_040255975.1	JBDZWB000000000	SAMN41489590	PE_soil3	Nitrosopumilales archaeon
GCA_040255845.1	JBDZVU000000000	SAMN41489597	PE_soil10	Nitrospiraceae bacterium
GCA_040255165.1	JBDZUK000000000	SAMN41489633	PE_seawater46	Nitrospiraceae bacterium
GCA_040255195.1	JBDZUO000000000	SAMN41489629	PE_seawater42	Nocardioides sp.
GCA_040255565.1	JBDZVH000000000	SAMN41489610	PE_dung23	Opitutaceae bacterium
GCA_040255475.1	JBDZVC000000000	SAMN41489615	PE_dung28	Phyllobacteriaceae bacterium
GCA_040255445.1	JBDZUZ000000000	SAMN41489618	PE_seawater31	Planctomycetaceae bacterium
GCA_040255465.1	JBDZVA000000000	SAMN41489617	PE_seawater30	Planctomycetaceae bacterium
GCA_040255575.1	JBDZVF000000000	SAMN41489612	PE_dung25	Pseudomonadota bacterium
GCA_040255215.1	JBDZUM000000000	SAMN41489631	PE_seawater44	Rhodospirillaceae bacterium
GCA_040255495.1	JBDZVB000000000	SAMN41489616	PE_dung29	Rubrivivax sp.
GCA_040255715.1	JBDZVN000000000	SAMN41489604	PE_dung17	Solirubrobacterales bacterium
GCA_040255945.1	JBDZVZ000000000	SAMN41489592	PE_soil5	Solirubrobacterales bacterium
GCA_040255955.1	JBDZWA000000000	SAMN41489591	PE_soil4	Sphingomonadales bacterium
GCA_040255785.1	JBDZVR000000000	SAMN41489600	PE_dung13	Sphingomonadales bacterium
GCA_040255765.1	JBDZVP000000000	SAMN41489602	PE_dung15	Sphingomonadales bacterium
GCA_040255385.1	JBDZUU000000000	SAMN41489623	PE_seawater36	Sphingomonadales bacterium
GCA_040255255.1	JBDZUR000000000	SAMN41489626	PE_seawater39	Terriglobales bacterium
GCA_040255705.1	JBDZVO000000000	SAMN41489603	PE_dung16	Thermomicrobia bacterium
GCA_040255925.1	JBDZVX000000000	SAMN41489594	PE_soil7	Thermomicrobia bacterium
GCA_040255595.1	JBDZVG000000000	SAMN41489611	PE_dung24	Verrucomicrobiales bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	65
Data volume, Mbytes	38796

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Shotgun metagenomics analysis of microbial consotia with PS,PE, and PET biodegradation properties

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