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Accession: PRJNA781406 ID: 781406

Vanishing Glaciers Project

Investigating the microbiomes associated to glacier-fed streams around the world
AccessionPRJNA781406
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsBusi SB et al., "Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams.", Nat Commun, 2022 Apr 20;13(1):2168
SubmissionRegistration date: 18-Nov-2021
EPFL
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)3387
SRA Experiments2240
Publications
PubMed1
PMC1
Other datasets
BioSample5571
Assembly3387
Assembly details:
Assembly levelNumber of Assemblies
3387
3387
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_043734795.1ContigJAYTEY000000000SAMN39314760
GFS_2120
GCA_043716955.1ContigJAYSXX000000000SAMN39314248
GFS_13321
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GFS_3240
GCA_043773205.1ContigJAYVFL000000000SAMN39315751
GL44_UP_concoct_128_sub
GCA_025352995.1ContigJANXRN000000000SAMN30205502
336R_metabat_199_sub
GCA_025352375.1ContigJANXTL000000000SAMN30205639
338R_metabat_61
GCA_025360065.1ContigJANYCX000000000SAMN30205551
336R_metabinner_29
GCA_025359765.1ContigJANYEV000000000SAMN30205654
338R_metabinner_48_sub
GCA_025356735.1ContigJANXRT000000000SAMN30205508
336R_metabat_323
GCA_025354865.1ContigJANXMB000000000SAMN30205490
336R_concoct_378_sub
GCA_025354345.1ContigJANXNB000000000SAMN30205667
339R_concoct_190
GCA_043761635.1ContigJAYUNO000000000SAMN39314975
GFS_9851
GCA_043750075.1ContigJAYVCG000000000SAMN39315855
GL30_UP_metabat_21_sub
GCA_043747105.1ContigJAYTPT000000000SAMN39314654
GFS_4453
GCA_043745345.1ContigJAYTTA000000000SAMN39314006
GFS_5291
GCA_043742865.1ContigJAYTXR000000000SAMN39315037
GFS_5980
GCA_043741635.1ContigJAYTZX000000000SAMN39315499
GFS_642
GCA_043739245.1ContigJAYUEM000000000SAMN39314969
GFS_7493
GCA_043785905.1ContigJAYVWT000000000SAMN39316469
GL82_UP_concoct_91
GCA_043785025.1ContigJAYVXQ000000000SAMN39316492
GL85_DN_metabat_19_sub
GCA_043782125.1ContigJAYWAX000000000SAMN39316530
GL93_DN_metabinner_11_sub
GCA_025350565.1ContigJANXXO000000000SAMN30205931
GL140_3_metabat_14
GCA_043784065.1ContigJAYVYR000000000SAMN39316519
GL85_UP_metabinner_2
GCA_043734285.1ContigJAYTFP000000000SAMN39314105
GFS_2200
GCA_043746415.1ContigJAYTRA000000000SAMN39313977
GFS_4723
GCA_043758265.1ContigJAYVNV000000000SAMN39315960
GL65_DN_metabinner_5
GCA_043777135.1ContigJAYVQN000000000SAMN39316022
GL72_UP_concoct_68_sub
GCA_025351385.1ContigJANXWA000000000SAMN30205819
GL140_1_metabat_294
GCA_025358985.1ContigJANYHQ000000000SAMN30205850
GL140_1_metabinner_83
GCA_025362585.1ContigJANYFR000000000SAMN30205711
339R_metabinner_7
GCA_043772215.1ContigJAYVGK000000000SAMN39316164
GL46_Up_concoct_70
GCA_043744575.1ContigJAYTUM000000000SAMN39314042
GFS_5549
GCA_043739605.1ContigJAYUDU000000000SAMN39315639
GFS_7248
GCA_043756365.1ContigJAYURF000000000SAMN39315431
GL116_DN_concoct_43_sub
GCA_043734485.1ContigJAYTFI000000000SAMN39314768
GFS_2147
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GFS_10992
GCA_043721635.1ContigJAYSQJ000000000SAMN39313955
GFS_11733
GCA_043782995.1ContigJAYVZV000000000SAMN39316636
GL91_UP_metabat_169
GCA_043788465.1ContigJAYVTY000000000SAMN39316088
GL74_UP_metabat_188_sub
GCA_025361725.1ContigJANYJV000000000SAMN30206034
GL140_4_metabinner_23
GCA_025359845.1ContigJANYDT000000000SAMN30205573
336R_metabinner_84
GCA_025357995.1ContigJANYLF000000000SAMN30206129
GL140_5_metabinner_93
GCA_043786655.1ContigJAYVVZ000000000SAMN39316449
GL80_UP_concoct_3
GCA_043782545.1ContigJAYWAI000000000SAMN39316625
GL92_UP_concoct_71
GCA_043722315.1ContigJAYSPB000000000SAMN39314070
GFS_114
GCA_043721355.1ContigJAYSQW000000000SAMN39314384
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GFS_10859
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GFS_10949
GCA_043726365.1ContigJAYSKM000000000SAMN39314011
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GFS_12196
GCA_043720395.1ContigJAYSSR000000000SAMN39314414
GFS_12223
GCA_043720295.1ContigJAYSSV000000000SAMN39314279
GFS_12315
GCA_043720055.1ContigJAYSTB000000000SAMN39314423
GFS_12374
GCA_043719845.1ContigJAYSTL000000000SAMN39314171
GFS_1243
GCA_043719425.1ContigJAYSTV000000000SAMN39314269
GFS_12523
GCA_043719335.1ContigJAYSUA000000000SAMN39314273
GFS_12570
GCA_043718695.1ContigJAYSVF000000000SAMN39314725
GFS_12750
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GCA_043718155.1ContigJAYSWF000000000SAMN39314348
GFS_12876
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GFS_13015
GCA_043730435.1ContigJAYTKG000000000SAMN39314524
GFS_3107
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GFS_2967
GCA_043733795.1ContigJAYTGC000000000SAMN39314115
GFS_2254
GCA_043731825.1ContigJAYTIL000000000SAMN39314097
GFS_2729
GCA_043738275.1ContigJAYUGU000000000SAMN39315083
GFS_8261
GCA_043756315.1ContigJAYURG000000000SAMN39315432
GL116_DN_metabat_127
GCA_043754155.1ContigJAYUVJ000000000SAMN39315259
GL124_DN_metabinner_10_sub
GCA_043753385.1ContigJAYUWV000000000SAMN39315579
GL13_Down_concoct_98
GCA_043750355.1ContigJAYVBQ000000000SAMN39315839
GL29_DN_concoct_81
GCA_043739745.1ContigJAYUDQ000000000SAMN39315635
GFS_7213
GCA_043741615.1ContigJAYUAA000000000SAMN39315500
GFS_6449
GCA_043741295.1ContigJAYUAM000000000SAMN39315512
GFS_6502
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GFS_5662
GCA_043743435.1ContigJAYTWN000000000SAMN39315011
GFS_5804
GCA_043745605.1ContigJAYTSM000000000SAMN39314511
GFS_5096
GCA_043747325.1ContigJAYTPH000000000SAMN39314653
GFS_4345
GCA_043748335.1ContigJAYTNI000000000SAMN39314787
GFS_3888
GCA_043775075.1ContigJAYVSS000000000SAMN39316056
GL74_DN_concoct_89
GCA_043779345.1ContigJAYWEJ000000000SAMN39316387
GL97_UP_metabat_53_sub
GCA_043759215.1ContigJAYVMB000000000SAMN39316233
GL58_Down_concoct_10
GCA_043759135.1ContigJAYVMD000000000SAMN39316235
GL58_Down_concoct_82
GCA_025357215.1ContigJANXPR000000000SAMN30205922
GL140_3_concoct_315
GCA_025356095.1ContigJANXUR000000000SAMN30205728
340R_metabat_142
GCA_025355505.1ContigJANXZM000000000SAMN30206014
GL140_4_metabat_333
GCA_025355385.1ContigJANXZS000000000SAMN30206020
GL140_4_metabat_397
GCA_025360145.1ContigJANYCV000000000SAMN30205549
336R_metabinner_230_sub
GCA_025360645.1ContigJANYBT000000000SAMN30206145
GL140_6_metabat_77
GCA_025361625.1ContigJANYKL000000000SAMN30206109
GL140_5_metabinner_17
GCA_025350325.1ContigJANXYB000000000SAMN30205944
GL140_3_metabat_263
GCA_025352065.1ContigJANXUC000000000SAMN30205688
339R_metabat_262
GCA_043765355.1ContigJAYUJG000000000SAMN39315545
GFS_895
GCA_043762915.1ContigJAYUME000000000SAMN39315875
GFS_9488
GCA_043746935.1ContigJAYTQD000000000SAMN39314660
GFS_4547
GCA_043741315.1ContigJAYUAN000000000SAMN39315513
GFS_6506
GCA_043741535.1ContigJAYUAC000000000SAMN39315502
GFS_6452
GCA_043749775.1ContigJAYVCW000000000SAMN39315146
GL32_Down_metabinner_4
GCA_043749225.1ContigJAYVEP000000000SAMN39315191
GL35_DN_metabat_92_sub
GCA_043751975.1ContigJAYUZH000000000SAMN39315586
GL15_Down_concoct_136_sub
GCA_043725945.1ContigJAYSKX000000000SAMN39314835
GFS_10208
GCA_043725395.1ContigJAYSLP000000000SAMN39314852
GFS_10472
GCA_043724225.1ContigJAYSMY000000000SAMN39314882
GFS_10835
GCA_043782485.1ContigJAYWAL000000000SAMN39316628
GL92_UP_metabinner_3
GCA_043781195.1ContigJAYWBU000000000SAMN39316553
GL93_UP_metabinner_34_sub
GCA_043783095.1ContigJAYVZT000000000SAMN39316634
GL91_DN_metabinner_8_sub
GCA_043788745.1ContigJAYVTO000000000SAMN39316078
GL74_UP_concoct_21
GCA_025352795.1ContigJANXSF000000000SAMN30205520
336R_metabat_83
GCA_025353435.1ContigJANXQR000000000SAMN30206048
GL140_5_concoct_288_sub
GCA_025353165.1ContigJANXRE000000000SAMN30206134
GL140_6_concoct_246_sub
GCA_025350535.1ContigJANXXQ000000000SAMN30205933
GL140_3_metabat_156_sub
GCA_025350695.1ContigJANXXI000000000SAMN30205896
GL140_2_metabat_67_sub
GCA_025359885.1ContigJANYDG000000000SAMN30205560
336R_metabinner_50
GCA_025358945.1ContigJANYHS000000000SAMN30205852
GL140_1_metabinner_89_sub
GCA_025354525.1ContigJANXMS000000000SAMN30205614
338R_concoct_101
GCA_025354885.1ContigJANXLY000000000SAMN30205487
336R_concoct_351_sub
GCA_025363775.1ContigJANYLG000000000SAMN30206130
GL140_5_metabinner_95
GCA_043786065.1ContigJAYVWN000000000SAMN39316463
GL82_UP_concoct_14
GCA_043783985.1ContigJAYVYV000000000SAMN39316640
GL86_DN_metabat_16_sub
GCA_043780065.1ContigJAYWDD000000000SAMN39316599
GL95_UP_concoct_109_sub
GCA_043723685.1ContigJAYSNO000000000SAMN39314897
GFS_10914
GCA_043721415.1ContigJAYSQX000000000SAMN39314385
GFS_11879
GCA_043717955.1ContigJAYSWR000000000SAMN39314314
GFS_12979
GCA_043718045.1ContigJAYSWM000000000SAMN39314310
GFS_12946
GCA_043718395.1ContigJAYSVS000000000SAMN39314337
GFS_12838
GCA_043718445.1ContigJAYSVR000000000SAMN39314336
GFS_12827
GCA_043718685.1ContigJAYSVD000000000SAMN39314299
GFS_12702
GCA_043737915.1ContigJAYSZT000000000SAMN39314188
GFS_13688
GCA_043734905.1ContigJAYTEV000000000SAMN39314758
GFS_2111
GCA_043735365.1ContigJAYTEJ000000000SAMN39314751
GFS_2025
GCA_043737215.1ContigJAYTBA000000000SAMN39314211
GFS_14056
GCA_043736995.1ContigJAYTBN000000000SAMN39314181
GFS_14275
GCA_043734125.1ContigJAYTFR000000000SAMN39314107
GFS_2207
GCA_043734305.1ContigJAYTFO000000000SAMN39314090
GFS_2191
GCA_043730365.1ContigJAYTKJ000000000SAMN39314525
GFS_3114
GCA_043730115.1ContigJAYTKO000000000SAMN39314067
GFS_3148
GCA_043751055.1ContigJAYVAL000000000SAMN39315808
GL26_DN_concoct_27
GCA_043752245.1ContigJAYUYZ000000000SAMN39315350
GL139_UP_metabinner_4
GCA_043749405.1ContigJAYVDM000000000SAMN39315162
GL34_DN_concoct_229
GCA_043750225.1ContigJAYVBX000000000SAMN39315846
GL30_DN_concoct_186
GCA_043750145.1ContigJAYVCE000000000SAMN39315853
GL30_UP_concoct_31
GCA_043755835.1ContigJAYUSE000000000SAMN39315456
GL117_DN_metabinner_7
GCA_043755655.1ContigJAYUSM000000000SAMN39315464
GL117_UP_concoct_38
GCA_043755595.1ContigJAYUSQ000000000SAMN39315468
GL117_UP_metabat_70
GCA_043741155.1ContigJAYUAW000000000SAMN39315783
GFS_6618
GCA_043740165.1ContigJAYUCR000000000SAMN39315619
GFS_6995
GCA_043740355.1ContigJAYUCM000000000SAMN39315614
GFS_6979
GCA_043740245.1ContigJAYUCP000000000SAMN39315617
GFS_6987
GCA_043743165.1ContigJAYTXA000000000SAMN39315023
GFS_5862
GCA_043744105.1ContigJAYTVH000000000SAMN39314984
GFS_5684
GCA_043742965.1ContigJAYTXM000000000SAMN39315604
GFS_5966
GCA_043742185.1ContigJAYTYY000000000SAMN39315495
GFS_6199
GCA_043746795.1ContigJAYTQH000000000SAMN39314449
GFS_4620
GCA_043747415.1ContigJAYTPE000000000SAMN39314437
GFS_4334
GCA_043745035.1ContigJAYTUB000000000SAMN39314532
GFS_5479
GCA_043764035.1ContigJAYULA000000000SAMN39315729
GFS_9303
GCA_043766315.1ContigJAYUIG000000000SAMN39315108
GFS_8640
GCA_043767445.1ContigJAYUGY000000000SAMN39315087
GFS_8291
GCA_043767395.1ContigJAYUHA000000000SAMN39315088
GFS_8318
GCA_043759095.1ContigJAYVMG000000000SAMN39316238
GL58_Up_concoct_85
GCA_043758915.1ContigJAYVMO000000000SAMN39315923
GL61_DN_concoct_89
GCA_043761205.1ContigJAYUOC000000000SAMN39315114
GL100_DN_concoct_188
GCA_043777455.1ContigJAYVQA000000000SAMN39316009
GL72_UP_concoct_191
GCA_043775375.1ContigJAYVSN000000000SAMN39316051
GL74_DN_concoct_272
GCA_043776355.1ContigJAYVRM000000000SAMN39316126
GL73_DN_concoct_173_sub
GCA_043775845.1ContigJAYVRY000000000SAMN39316138
GL73_DN_metabinner_17
GCA_043772695.1ContigJAYVFY000000000SAMN39315764
GL45_Down_concoct_159_sub
GCA_043773785.1ContigJAYVEW000000000SAMN39315198
GL36_UP_metabinner_12
GCA_043769395.1ContigJAYVJJ000000000SAMN39316300
GL53_Down_concoct_99
GCA_043769325.1ContigJAYVJN000000000SAMN39316304
GL53_Down_metabat_36
GCA_043717515.1ContigJAYSXI000000000SAMN39314261
GFS_13147
GCA_043773465.1ContigJAYVFE000000000SAMN39315744
GL42_DN_concoct_87_sub
GCA_025363815.1ContigJANYLB000000000SAMN30206125
GL140_5_metabinner_8
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336R_concoct_365
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336R_concoct_83_sub
GCA_025355305.1ContigJANXZW000000000SAMN30206024
GL140_4_metabat_47
GCA_025355205.1ContigJANYAC000000000SAMN30206063
GL140_5_metabat_160_sub
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GL140_4_metabat_259_sub
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GL140_4_metabat_142
GCA_025355765.1ContigJANXZB000000000SAMN30206003
GL140_4_metabat_202
GCA_025356335.1ContigJANXUF000000000SAMN30205691
339R_metabat_287
GCA_025356845.1ContigJANXQH000000000SAMN30205995
GL140_4_concoct_44
GCA_025356835.1ContigJANXQI000000000SAMN30205996
GL140_4_concoct_78
GCA_025357115.1ContigJANXPW000000000SAMN30205927
GL140_3_concoct_76_sub
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GL140_2_metabinner_138_sub
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GL140_4_metabinner_37
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336R_metabinner_51
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336R_metabinner_25
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GFS_14050
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GFS_7628
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GFS_7891
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GFS_2217
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GFS_11384
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GFS_10520
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GFS_10742
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GFS_1044
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GFS_4827
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GFS_4931
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GFS_4145
GCA_043747765.1ContigJAYTOM000000000SAMN39313959
GFS_4112
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GFS_6300
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GFS_5813
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GFS_5847
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GFS_6809
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GFS_6474
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GFS_6470
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GFS_6453
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GFS_6450
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GL124_UP_metabat_89
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GFS_6115
GCA_043742265.1ContigJAYTYR000000000SAMN39315058
GFS_6146
GCA_043754825.1ContigJAYUUP000000000SAMN39315239
GL122_UP_metabinner_21_sub
GCA_043756445.1ContigJAYURA000000000SAMN39315426
GL115_UP_metabinner_16
GCA_043753485.1ContigJAYUWQ000000000SAMN39315292
GL127_UP_concoct_103
GCA_043753565.1ContigJAYUWM000000000SAMN39315288
GL124_UP_metabinner_16
GCA_043751115.1ContigJAYVAE000000000SAMN39315801
GL22_UP_metabat_32
GCA_043751135.1ContigJAYVAF000000000SAMN39315802
GL22_UP_metabinner_2
GCA_043751415.1ContigJAYUZX000000000SAMN39315602
GL17_Up_concoct_71
GCA_043750375.1ContigJAYVBT000000000SAMN39315842
GL29_UP_concoct_107_sub
GCA_043717355.1ContigJAYSXJ000000000SAMN39314262
GFS_13148
GCA_043716755.1ContigJAYSXZ000000000SAMN39314250
GFS_13345
GCA_043717115.1ContigJAYSXQ000000000SAMN39314242
GFS_13250
GCA_043718245.1ContigJAYSWB000000000SAMN39314344
GFS_12865
GCA_043718735.1ContigJAYSVC000000000SAMN39314668
GFS_12699
GCA_043717905.1ContigJAYSWT000000000SAMN39314316
GFS_12994
GCA_043719155.1ContigJAYSUJ000000000SAMN39314284
GFS_12623
GCA_043719295.1ContigJAYSUD000000000SAMN39314280
GFS_12610
GCA_043719005.1ContigJAYSUP000000000SAMN39314289
GFS_12642
GCA_043720095.1ContigJAYSTD000000000SAMN39314425
GFS_12383
GCA_043722175.1ContigJAYSPG000000000SAMN39314793
GFS_11475
GCA_043723165.1ContigJAYSOF000000000SAMN39314909
GFS_11017
GCA_043720715.1ContigJAYSSF000000000SAMN39314369
GFS_12125
GCA_043721155.1ContigJAYSRG000000000SAMN39314533
GFS_11902
GCA_043726795.1ContigJAYSKB000000000SAMN39314463
GFS_1003
GCA_043725295.1ContigJAYSLS000000000SAMN39314465
GFS_1049
GCA_043725085.1ContigJAYSLY000000000SAMN39314859
GFS_10512
GCA_043724765.1ContigJAYSMK000000000SAMN39314869
GFS_10664
GCA_043724745.1ContigJAYSML000000000SAMN39314870
GFS_10668
GCA_043724565.1ContigJAYSMO000000000SAMN39314873
GFS_10704
GCA_043724505.1ContigJAYSMR000000000SAMN39314876
GFS_10719
GCA_043724245.1ContigJAYSMZ000000000SAMN39314883
GFS_10842
GCA_043736515.1ContigJAYTCK000000000SAMN39314705
GFS_1518
GCA_043736875.1ContigJAYTBU000000000SAMN39314598
GFS_14393
GCA_043738715.1ContigJAYUFM000000000SAMN39315670
GFS_7744
GCA_043738405.1ContigJAYUGH000000000SAMN39315680
GFS_8028
GCA_043737415.1ContigJAYTAQ000000000SAMN39314196
GFS_13950
GCA_043732005.1ContigJAYTIF000000000SAMN39314159
GFS_2649
GCA_043731205.1ContigJAYTJK000000000SAMN39314806
GFS_2948
GCA_043728975.1ContigJAYTMA000000000SAMN39314552
GFS_3428
GCA_043728765.1ContigJAYTMD000000000SAMN39314650
GFS_3474
GCA_043729145.1ContigJAYTLV000000000SAMN39314571
GFS_3390
GCA_043728695.1ContigJAYTMH000000000SAMN39314637
GFS_3553
GCA_043728475.1ContigJAYTMN000000000SAMN39314628
GFS_3657
GCA_043728335.1ContigJAYTMS000000000SAMN39314632
GFS_3738
GCA_043728155.1ContigJAYTMX000000000SAMN39314607
GFS_3829
GCA_043730705.1ContigJAYTKA000000000SAMN39314569
GFS_3062
GCA_043730105.1ContigJAYTKP000000000SAMN39314528
GFS_3150
GCA_043729885.1ContigJAYTKZ000000000SAMN39314643
GFS_3232
GCA_023347065.1ContigJAJQPH000000000SAMN22036267
concoct_113
SRA Data Details
ParameterValue
Data volume, Gbases18,486
Data volume, Tbytes5.79

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