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Accession: PRJNA74595 ID: 74595

Octodon degus (degu)

Octodon degus Genome sequencing and assembly

See Genome Information for Octodon degus
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This project is a component of the NHGRI Large Scale Sequencing Program for Organismal Sequencing
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4 additional projects are related by organism.
149 additional projects are components of the NHGRI Large Scale Sequencing Program for Organismal Sequencing.
Octodon degus (Degu) genome sequencing using Illumina sequencing with multiple library types.
AccessionPRJNA74595
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismOctodon degus[Taxonomy ID: 10160]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon; Octodon degus
PublicationsTomasco IH et al., "The evolution of mitochondrial genomes in subterranean caviomorph rodents: adaptation against a background of purifying selection.", Mol Phylogenet Evol, 2011 Oct;61(1):64-70
SubmissionRegistration date: 19-Apr-2012
Broad Institute
RelevanceModel Organism
Locus Tag PrefixM5I
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)248416
WGS master1
SRA Experiments12
Publications
PubMed1
Other datasets
BioSample2
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000260255.1ScaffoldAJSA00000000SAMN00769067
Octodon degus
SRA Data Details
ParameterValue
Data volume, Gbases389
Data volume, Tbytes0.25
Related RefSeq Project
PRJNA193441 : Octodon degus RefSeq Genome

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