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Accession: PRJNA13139 ID: 13139

Oryza sativa Japonica Group strain:Nipponbare (Japanese rice)

Whole genome shotgun sequencing project of Oryza sativa ssp japonica genome by Chinese Academy of Sciences

See Genome Information for Oryza sativa
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Oryza sativa ssp japonica genome was assembled by the Beijing Genomics Institute using the raw trace data of Syngenta. More...

AccessionPRJNA13139
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismOryza sativa Japonica Group[Taxonomy ID: 39947]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa Japonica Group
PublicationsYu J et al., "The Genomes of Oryza sativa: a history of duplications.", PLoS Biol, 2005 Feb;3(2):e38
SubmissionRegistration date: 21-Oct-2004
Beijing Genomics Institute
Related Resources
Locus Tag PrefixOSJ
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1437
WGS master1
Protein Sequences35394
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_000149285.1ChromosomeAACV00000000
12
SAMN02953597
Oryza sativa Japonica Group

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