Histoplasma mississippiense (nom. inval.) strain:N... (ID 12654) - BioProject

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Accession: PRJNA12654 ID: 12654

Histoplasma mississippiense (nom. inval.) strain:NAm1

Histoplasma mississippiense (nom. inval.) strain:NAm1 Genome sequencing and assembly

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This project is a component of the Comparative genomic study of Coccidioides species and their relatives in the Onygenales

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3 additional projects are components of the Comparative genomic study of Coccidioides species and their relatives in the Onygenales.

1 additional project is related by organism.

The Broad Institute sequenced the Ajellomyces capsulatus NAm I genome at 7X coverage using whole genome shotgun (WGS) sequencing. More...

Accession	PRJNA12654
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Histoplasma mississippiense (nom. inval.)[Taxonomy ID: 2059318] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; Histoplasma mississippiense (nom. inval.)
Publications	Sharpton TJ et al., "Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives.", Genome Res, 2009 Oct;19(10):1722-31
Submission	Registration date: 19-Sep-2005 Broad Institute
Related Resources	GOLD
Relevance	Medical
Locus Tag Prefix	HCAG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	281
WGS master	1
Protein Sequences	9313
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_000149585.1	Scaffold	AAJI00000000	SAMN02953633	Histoplasma mississippiense (nom. inval.)

Related RefSeq Project

PRJNA20041 : Histoplasma capsulatum NAm1 RefSeq Genome

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Related Resources

GOLD
GOLD

LinkOut to external resources

GOLD: Gp0002625 [Genomes On Line Database]
GOLD: Gp0002625
Genomes On Line Database
645666401: Histoplasma mississippiense NAm1 [Integrated Microbial Genomes]
645666401: Histoplasma mississippiense NAm1
Integrated Microbial Genomes
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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Histoplasma mississippiense (nom. inval.) strain:NAm1
Histoplasma mississippiense (nom. inval.) strain:NAm1
Histoplasma mississippiense (nom. inval.) strain:NAm1 Genome sequencing and assembly

BioProject
BioProject Links for Nucleotide (Select 76008295) (1)
BioProject
ELFN1 extracellular leucine rich repeat and fibronectin type III domain containi...
ELFN1 extracellular leucine rich repeat and fibronectin type III domain containing 1 [Homo sapiens]
Gene ID:392617

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Gene Links for GEO Profiles (Select 72031536) (1)
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Related DataSets for GEO Profiles (Select 123506699) (1)
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