Cyprinus carpio (ID 73579) - BioProject

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Accession: PRJNA73579 ID: 73579

Cyprinus carpio (common carp)

Cyprinus carpio Genome sequencing and assembly

See Genome Information for Cyprinus carpio

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108 additional projects are related by organism.

Sequencing of the common carp (Cyprinus carpio carpio Linnaeus, 1758) genome, with the objective of establishing carp as a model organism to supplement the closely related zebrafish (Danio rerio). More...

Accession	PRJNA73579
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Cyprinus carpio[Taxonomy ID: 7962] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus; Cyprinus carpio
Publications	Kolder IC et al., "A full-body transcriptome and proteome resource for the European common carp.", BMC Genomics, 2016 Sep 2;17(1):701
Submission	Registration date: 18-Aug-2015 ZF-screens B.V.
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	18449
WGS master	1
SRA Experiments	1
Protein Sequences	50486
Publications
PubMed	1
PMC	1
Other datasets
BioSample	94
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_001270105.1	Scaffold	LHQP00000000	SAMN03856486	Cyprinus carpio

SRA Data Details

Parameter	Value
Data volume, Gbases	7
Data volume, Mbytes	5052

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LinkOut to external resources

GOLD: Gp0039095 [Genomes On Line Database]
GOLD: Gp0039095
Genomes On Line Database
SILVA SSU Database [SILVA]
SILVA SSU Database
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Cyprinus carpio
Cyprinus carpio
Cyprinus carpio Genome sequencing and assembly

BioProject
BioProject Links for Nucleotide (Select 918111046) (1)
BioProject
Cyprinus carpio isolate UL-001 Contig29604, whole genome shotgun sequence
Cyprinus carpio isolate UL-001 Contig29604, whole genome shotgun sequence
gi|918116520|gnl|WGS:LHQP01|Contig2 gb|LHQP01029574.1|

Nucleotide
Cyprinus carpio isolate UL-001 Contig1901, whole genome shotgun sequence
Cyprinus carpio isolate UL-001 Contig1901, whole genome shotgun sequence
gi|918146347|gnl|WGS:LHQP01|Contig1 b|LHQP01001900.1|

Nucleotide
Cyprinus carpio isolate UL-001 Contig43730, whole genome shotgun sequence
Cyprinus carpio isolate UL-001 Contig43730, whole genome shotgun sequence
gi|918101396|gnl|WGS:LHQP01|Contig4 gb|LHQP01043676.1|

Nucleotide

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