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Links from Nucleotide

Accession: PRJNA262935 ID: 262935

sediment metagenome

Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 Metagenome

Rifle CO subsurface soil sediment (16ft).
AccessionPRJNA262935
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsediment metagenome[Taxonomy ID: 749907]
unclassified sequences; metagenomes; ecological metagenomes; sediment metagenome
PublicationsHug LA et al., "Aquifer environment selects for microbial species cohorts in sediment and groundwater.", ISME J, 2015 Aug;9(8):1846-56
SubmissionRegistration date: 13-Nov-2015
DOE Joint Genome Institute
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)732
WGS master8
Genomic DNA155
SRA Experiments1
Protein Sequences22934
Publications
PubMed1
PMC1
Other datasets
BioSample9
Assembly8
Genome assemblies, organelles and plasmids:
Assembly GCA_001443365.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXL00000000
Assembly GCA_001443375.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXM00000000
Assembly GCA_001443385.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXP00000000
Assembly GCA_001443395.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXK00000000
Assembly GCA_001443445.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXN00000000
Assembly GCA_001443455.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXO00000000
Assembly GCA_001443485.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXQ00000000
Assembly GCA_001443495.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDXR00000000
SRA Data Details
ParameterValue
Data volume, Gbases43
Data volume, Mbytes27856

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