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Accession: PRJNA174606 ID: 174606

Homo sapiens (human)

The effect of knock-down of neuroblastoma associated lncRNA on transcriptome

See Genome Information for Homo sapiens
As part of functional characterization of neuroblastoma associated lncRNA HOXD-AS1, we performed its knock-down in neuroblastoma cell line SH-SY5Y, which resulted in modulation of expression levels of a set of genes involved in angiogenesis and inflammation, the hallmarks of metastatic cancer. More...
AccessionPRJNA174606; GEO: GSE40680
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsYarmishyn AA et al., "HOXD-AS1 is a novel lncRNA encoded in HOXD cluster and a marker of neuroblastoma progression revealed via integrative analysis of noncoding transcriptome.", BMC Genomics, 2014;15 Suppl 9(Suppl 9):S7
SubmissionRegistration date: 7-Sep-2012
Taipei Veterans General Hospital
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots567840
Data volume, Processed Mbytes14
Data volume, Supplementary Mbytes3

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