Pseudomonas syringae pv. actinidiae (ID 359702) - BioProject

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Accession: PRJNA359702 ID: 359702

Pseudomonas syringae pv. actinidiae

Origin and evolution of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae

See Genome Information for Pseudomonas syringae

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Phylogeography and epidemiology of the kiwifruit (Actinidia spp.) pathogen Pseudomonas syringae pv. More...

Accession	PRJNA359702
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Pseudomonas syringae pv. actinidiae[Taxonomy ID: 103796] Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae; Pseudomonas syringae pv. actinidiae
Publications	McCann HC et al., "Origin and Evolution of the Kiwifruit Canker Pandemic.", Genome Biol Evol, 2017 Apr 1;9(4):932-944
Submission	Registration date: 27-Apr-2017 - Massey University - New Zealand Genomics Limited - Novogene
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	15349
WGS master	48
SRA Experiments	50
Protein Sequences	271802
Publications
PubMed	1
PMC	1
Other datasets
BioSample	50
Assembly	48

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

27
21
48

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002112135.1	MTZJ00000000	SAMN06197093	NZ49	Pseudomonas syringae pv. actinidiae
GCA_002112125.1	MTZI00000000	SAMN06197091	NZ47	Pseudomonas syringae pv. actinidiae
GCA_002112165.1	MTZL00000000	SAMN06197095	NZ59	Pseudomonas syringae pv. actinidiae
GCA_002112095.1	MTZH00000000	SAMN06197092	NZ48	Pseudomonas syringae pv. actinidiae
GCA_002112085.1	MTZG00000000	SAMN06197090	NZ46	Pseudomonas syringae pv. actinidiae
GCA_002112005.1	MTZD00000000	SAMN06197087	NZ42	Pseudomonas syringae pv. actinidiae
GCA_002112065.1	MTZF00000000	SAMN06197089	NZ45	Pseudomonas syringae pv. actinidiae
GCA_002112045.1	MTZE00000000	SAMN06197088	NZ43	Pseudomonas syringae pv. actinidiae
GCA_002111995.1	MTZB00000000	SAMN06197085	NZ40	Pseudomonas syringae pv. actinidiae
GCA_002111985.1	MTZC00000000	SAMN06197086	NZ41	Pseudomonas syringae pv. actinidiae
GCA_002111955.1	MTYZ00000000	SAMN06197083	NZ38	Pseudomonas syringae pv. actinidiae
GCA_002111945.1	MTYY00000000	SAMN06197082	NZ37	Pseudomonas syringae pv. actinidiae
GCA_002111925.1	MTYX00000000	SAMN06197081	NZ35	Pseudomonas syringae pv. actinidiae
GCA_002111885.1	MTYW00000000	SAMN06197080	K7	Pseudomonas syringae pv. actinidiae
GCA_002111875.1	MTYU00000000	SAMN06197078	K5	Pseudomonas syringae pv. actinidiae
GCA_002111865.1	MTYV00000000	SAMN06197079	K6	Pseudomonas syringae pv. actinidiae
GCA_002111835.1	MTYT00000000	SAMN06197077	K4	Pseudomonas syringae pv. actinidiae
GCA_002111805.1	MTYS00000000	SAMN06197075	J38	Pseudomonas syringae pv. actinidiae
GCA_002111795.1	MTYR00000000	SAMN06197074	C75	Pseudomonas syringae pv. actinidiae
GCA_002111785.1	MTYQ00000000	SAMN06197073	C74	Pseudomonas syringae pv. actinidiae
GCA_002111755.1	MTYP00000000	SAMN06197072	C73	Pseudomonas syringae pv. actinidiae
GCA_002111745.1	MTYO00000000	SAMN06197070	C69	Pseudomonas syringae pv. actinidiae
GCA_002111695.1	MTYN00000000	SAMN06197071	C70	Pseudomonas syringae pv. actinidiae
GCA_002111685.1	MTYM00000000	SAMN06197069	C68	Pseudomonas syringae pv. actinidiae
GCA_002111675.1	MTYK00000000	SAMN06197067	C66	Pseudomonas syringae pv. actinidiae
GCA_002111665.1	MTYL00000000	SAMN06197068	C67	Pseudomonas syringae pv. actinidiae
GCA_002113925.1	MTZK00000000	SAMN06197094	NZ54	Pseudomonas syringae pv. actinidiae
GCA_002113905.1	MTZA00000000	SAMN06197084	NZ39	Pseudomonas syringae pv. actinidiae
GCA_002174875.1	MTCQ00000000	SAMN06197031	C3	Pseudomonas syringae pv. actinidiae
GCA_002175005.1	MTHQ00000000	SAMN06197055	C17	Pseudomonas syringae pv. actinidiae
GCA_002174985.1	MTHN00000000	SAMN06197052	C14	Pseudomonas syringae pv. actinidiae
GCA_002174995.1	MTHP00000000	SAMN06197054	C16	Pseudomonas syringae pv. actinidiae
GCA_002174975.1	MTHO00000000	SAMN06197053	C15	Pseudomonas syringae pv. actinidiae
GCA_002174935.1	MTHK00000000	SAMN06197049	C11	Pseudomonas syringae pv. actinidiae
GCA_002174905.1	MTHJ00000000	SAMN06197048	C10	Pseudomonas syringae pv. actinidiae
GCA_002174925.1	MTHM00000000	SAMN06197051	C13	Pseudomonas syringae pv. actinidiae
GCA_002174895.1	MTHL00000000	SAMN06197050	C12	Pseudomonas syringae pv. actinidiae
GCA_002175245.1	MTIB00000000	SAMN06197066	C62	Pseudomonas syringae pv. actinidiae
GCA_002175215.1	MTHZ00000000	SAMN06197064	C48	Pseudomonas syringae pv. actinidiae
GCA_002175225.1	MTIA00000000	SAMN06197065	C54	Pseudomonas syringae pv. actinidiae
GCA_002175185.1	MTHY00000000	SAMN06197063	C31	Pseudomonas syringae pv. actinidiae
GCA_002175175.1	MTHW00000000	SAMN06197061	C29	Pseudomonas syringae pv. actinidiae
GCA_002175135.1	MTHV00000000	SAMN06197060	C28	Pseudomonas syringae pv. actinidiae
GCA_002175145.1	MTHX00000000	SAMN06197062	C30	Pseudomonas syringae pv. actinidiae
GCA_002175085.1	MTHS00000000	SAMN06197057	C24	Pseudomonas syringae pv. actinidiae
GCA_002175075.1	MTHU00000000	SAMN06197059	C27	Pseudomonas syringae pv. actinidiae
GCA_002175065.1	MTHR00000000	SAMN06197056	C18	Pseudomonas syringae pv. actinidiae
GCA_002175055.1	MTHT00000000	SAMN06197058	C26	Pseudomonas syringae pv. actinidiae

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	28474

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Pseudomonas syringae pv. actinidiae

Origin and evolution of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae

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